RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 FAM102BQ5T8I3 360 aa21.66■■□□□ 1.06
SHF-205ENST00000559566 SPRED2Q7Z698 418 aa21.66■■□□□ 1.06
SHF-205ENST00000559566 KRI1Q8N9T8 703 aaKnown RBP21.66■■□□□ 1.06
SHF-205ENST00000559566 CCSER1Q9C0I3 900 aa21.66■■□□□ 1.06
SHF-205ENST00000559566 TSPYL2Q9H2G4 693 aaPredicted RBP21.66■■□□□ 1.06
SHF-205ENST00000559566 LOXHD1Q8IVV2 1947 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 A0A087X0B3 334 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 GPR182O15218 404 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 UPP2O95045 317 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 SLC12A3P55017 1021 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 MAPK7Q13164 816 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 RINT1Q6NUQ1 792 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 C1orf186Q6ZWK4 172 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 DAW1Q8N136 415 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 CRIPAKQ8N1N5 446 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 ZNF710Q8N1W2 664 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 MCPH1Q8NEM0 835 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 TOP1MTQ969P6 601 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 TIFAQ96CG3 184 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 ADAM2Q99965 735 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 PCDHA11Q9Y5I1 949 aa21.65■■□□□ 1.06
SHF-205ENST00000559566 PPP6R2O75170 966 aa21.64■■□□□ 1.05
SHF-205ENST00000559566 PLA2G4BP0C869 781 aa21.64■■□□□ 1.05
SHF-205ENST00000559566 CDC42EP1Q00587 391 aa21.64■■□□□ 1.05
SHF-205ENST00000559566 AXDND1Q5T1B0 1012 aaPredicted RBP21.64■■□□□ 1.05
SHF-205ENST00000559566 SYT2Q8N9I0 419 aaPredicted RBP21.64■■□□□ 1.05
SHF-205ENST00000559566 CDK5RAP3Q96JB5 506 aa21.64■■□□□ 1.05
SHF-205ENST00000559566 FTHL17Q9BXU8 183 aa21.64■■□□□ 1.05
SHF-205ENST00000559566 NT5C3AQ9H0P0 336 aa21.64■■□□□ 1.05
SHF-205ENST00000559566 COL4A6Q14031 1691 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 NPHP3-ACAD11A0A0J9YXS1 232 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 ASAP2O43150 1006 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 SLC26A4O43511 780 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 SSBP05455 408 aaKnown RBP eCLIP21.63■■□□□ 1.05
SHF-205ENST00000559566 CA3P07451 260 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 PTENP60484 403 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 MXD4Q14582 209 aaPredicted RBP21.63■■□□□ 1.05
SHF-205ENST00000559566 RAB30Q15771 203 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 NAALADL2Q58DX5 795 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 CALML4Q96GE6 196 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 FAM161BQ96MY7 647 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 RGS18Q9NS28 235 aa21.63■■□□□ 1.05
SHF-205ENST00000559566 C9IYK1 514 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 TLL1O43897 1013 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 IBSPP21815 317 aaPredicted RBP21.62■■□□□ 1.05
SHF-205ENST00000559566 GATMP50440 423 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 HTRA4P83105 476 aaPredicted RBP21.62■■□□□ 1.05
SHF-205ENST00000559566 MBTD1Q05BQ5 628 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 MCM6Q14566 821 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 ARSHQ5FYA8 562 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 SHC4Q6S5L8 630 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 SRGAP1Q7Z6B7 1085 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 IFNLR1Q8IU57 520 aaPredicted RBP21.62■■□□□ 1.05
SHF-205ENST00000559566 RAD54LQ92698 747 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 KIFC3Q9BVG8 833 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 MSRAQ9UJ68 235 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 GBF1Q92538 1859 aa21.62■■□□□ 1.05
SHF-205ENST00000559566 ADGRA3Q8IWK6 1321 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 HIP1RO75146 1068 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 CACNB1Q02641 598 aaPredicted RBP21.61■■□□□ 1.05
SHF-205ENST00000559566 RAD51AP2Q09MP3 1159 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 DHX8Q14562 1220 aaKnown RBP21.61■■□□□ 1.05
SHF-205ENST00000559566 AMHR2Q16671 573 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 ATL3Q6DD88 541 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 GPR153Q6NV75 609 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 CATSPER4Q7RTX7 472 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 RAD9AQ99638 391 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 ZBED2Q9BTP6 218 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 PANK2Q9BZ23 570 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 RC3H2Q9HBD1 1191 aaKnown RBP21.61■■□□□ 1.05
SHF-205ENST00000559566 RCOR1Q9UKL0 485 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 PCDHA7Q9UN72 937 aa21.61■■□□□ 1.05
SHF-205ENST00000559566 DENND3A2RUS2 1198 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 LRRIQ4A6NIV6 560 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 SFI1A8K8P3 1242 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 EDN1P05305 212 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 SFPQP23246 707 aaKnown RBP eCLIP21.6■■□□□ 1.05
SHF-205ENST00000559566 HOXA11P31270 313 aaPredicted RBP21.6■■□□□ 1.05
SHF-205ENST00000559566 PHKA2P46019 1235 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 SARSP49591 514 aaKnown RBP21.6■■□□□ 1.05
SHF-205ENST00000559566 FAM189BP81408 668 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 POU5F1BQ06416 359 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 TFDP1Q14186 410 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 ODR4Q5SWX8 454 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 CDCA2Q69YH5 1023 aaPredicted RBP21.6■■□□□ 1.05
SHF-205ENST00000559566 KCTD17Q8N5Z5 321 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 DEFB123Q8N688 67 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 LEO1Q8WVC0 666 aaPredicted RBP21.6■■□□□ 1.05
SHF-205ENST00000559566 INO80BQ9C086 356 aaPredicted RBP21.6■■□□□ 1.05
SHF-205ENST00000559566 SEMA6BQ9H3T3 888 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 AGPAT5Q9NUQ2 364 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 CHD9Q3L8U1 2897 aa21.6■■□□□ 1.05
SHF-205ENST00000559566 TTLL13PA6NNM8 815 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 B4GALT5O43286 388 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 TSPAN1O60635 241 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 CUTAO60888 179 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 GUCY2CP25092 1073 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 TAP1Q03518 808 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 ZNF697Q5TEC3 545 aa21.59■■□□□ 1.05
SHF-205ENST00000559566 SLC24A5Q71RS6 500 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms