RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 XAGE2Q96GT9 111 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 CDC5LQ99459 802 aaKnown RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 IFIH1Q9BYX4 1025 aaKnown RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 ZNF287Q9HBT7 754 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 GPAMQ9HCL2 828 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 C8orf4Q9NR00 106 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 SH3GLB2Q9NR46 395 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 TCP11L1Q9NUJ3 509 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 MBD2Q9UBB5 411 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 TUBGCP4Q9UGJ1 667 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PADI4Q9UM07 663 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 EFR3BQ9Y2G0 817 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PCDHGA4Q9Y5G9 962 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 SQORQ9Y6N5 450 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 TNKSO95271 1327 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 TSPOAP1O95153 1857 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ERBB3P21860 1342 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 AFF2P51816 1311 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ARPC4-TTLL3A0A0A6YYG9 625 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ANKRD62A6NC57 917 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PALM3A6NDB9 673 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 TMEM247A6NEH6 219 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 SPDYE3A6NKU9 549 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 GAS2O43903 313 aaKnown RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 SNX2O60749 519 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 DKC1O60832 514 aaKnown RBP eCLIP2.55□□□□□ -2
RGPD1-204ENST00000559485 ATP6V1G1O75348 118 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 POLR3DP05423 398 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 HSPA8P11142 646 aaKnown RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 SCG2P13521 617 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PORP16435 677 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 PTPREP23469 700 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 FOSBP53539 338 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 DEFA1P59665 94 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 DEFA3P59666 94 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 NCAPHQ15003 741 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 LETM2Q2VYF4 491 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 RARS2Q5T160 578 aaKnown RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 TWF2Q6IBS0 349 aaKnown RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 RWDD4Q6NW29 188 aaKnown RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 ZNF530Q6P9A1 599 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 G2E3Q7L622 706 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 HAUS6Q7Z4H7 955 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PROSER2Q86WR7 435 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 KIAA2013Q8IYS2 634 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 CNBD1Q8NA66 436 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 RFWD2Q8NHY2 731 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 AIDAQ96BJ3 306 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 DYDC2Q96IM9 177 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 FAM227BQ96M60 508 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 EFHD1Q9BUP0 239 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 C1orf50Q9BV19 199 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 RNF26Q9BY78 433 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 UBN1Q9NPG3 1134 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 DLGAP2Q9P1A6 1054 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 CHPF2Q9P2E5 772 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 GNPTGQ9UJJ9 305 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ITM2BQ9Y287 266 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 CLIC4Q9Y696 253 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ARHGAP23Q9P227 1491 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ATRNO75882 1429 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 TRIM43BA6NCK2 446 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 C5orf60A6NFR6 353 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 DCAF8L1A6NGE4 600 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 SOWAHDA6NJG2 315 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 TMEM114B3SHH9 223 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 APOL1O14791 398 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PGM3O95394 542 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 MMP1P03956 469 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PAEPP09466 180 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 OCM2P0CE71 109 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 OCMP0CE72 109 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 IL12AP29459 219 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 EEF1DP29692 281 aaKnown RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 RFC1P35251 1148 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 TRPC1P48995 793 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 SLC34A1Q06495 639 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PDCLQ13371 301 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 LGSNQ5TDP6 509 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PPP1R2P3Q6NXS1 205 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 TLDC1Q6P9B6 456 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 XKRXQ6PP77 449 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ACAD11Q709F0 780 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 RNF135Q8IUD6 432 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 MB21D1Q8N884 522 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ZNF512BQ96KM6 892 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 CNBD2Q96M20 576 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 WDR24Q96S15 920 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 CCDC8Q9H0W5 538 aaPredicted RBP2.55□□□□□ -2
RGPD1-204ENST00000559485 CCSER2Q9H7U1 834 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 BRD9Q9H8M2 597 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 AS3MTQ9HBK9 375 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ZFP69BQ9UJL9 534 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 SNX12Q9UMY4 172 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 MAP3K19Q56UN5 1328 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 SSU72P8A0A1W2PR75 194 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 BTNL10A8MVZ5 291 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 PODXLO00592 558 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 ASNA1O43681 348 aa2.55□□□□□ -2
RGPD1-204ENST00000559485 CTNND1O60716 968 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms