RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TCP11Q8WWU5 503 aa14.05□□□□□ -0.16
LRRC28-214ENST00000559433 PSPC1Q8WXF1 523 aaKnown RBP14.05□□□□□ -0.16
LRRC28-214ENST00000559433 ATP6V0A4Q9HBG4 840 aa14.05□□□□□ -0.16
LRRC28-214ENST00000559433 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
LRRC28-214ENST00000559433 COL4A3BPQ9Y5P4 624 aa14.05□□□□□ -0.16
LRRC28-214ENST00000559433 PLXNA4Q9HCM2 1894 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 TBKBP1A7MCY6 615 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 C5orf67F2Z3F1 127 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 LYPLA2O95372 231 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 TIGD5Q53EQ6 642 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 FAM102BQ5T8I3 360 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 EP400NLQ6ZTU2 488 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 RNF169Q8NCN4 708 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
LRRC28-214ENST00000559433 MTRQ99707 1265 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 PLVAPQ9BX97 442 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 INO80BQ9C086 356 aaPredicted RBP14.04□□□□□ -0.16
LRRC28-214ENST00000559433 AAASQ9NRG9 546 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 ANKEF1Q9NU02 776 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 SMC3Q9UQE7 1217 aa14.04□□□□□ -0.16
LRRC28-214ENST00000559433 VCANP13611 3396 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 H3BQV1 296 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 SRGAP2CP0DJJ0 459 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 FGFR1P11362 822 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 TOB1P50616 345 aaPredicted RBP14.03□□□□□ -0.16
LRRC28-214ENST00000559433 FAM189BP81408 668 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 TFF2Q03403 129 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 CATSPER4Q7RTX7 472 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 ABI1Q8IZP0 508 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 ERMNQ8TAM6 284 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 PIGOQ8TEQ8 1089 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 BACH2Q9BYV9 841 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 ELAC1Q9H777 363 aaKnown RBP14.03□□□□□ -0.16
LRRC28-214ENST00000559433 TUFT1Q9NNX1 390 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 DACT1Q9NYF0 836 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 PIN4Q9Y237 131 aaKnown RBP14.03□□□□□ -0.16
LRRC28-214ENST00000559433 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.03□□□□□ -0.16
LRRC28-214ENST00000559433 PCDHB12Q9Y5F1 795 aa14.03□□□□□ -0.16
LRRC28-214ENST00000559433 BRWD1Q9NSI6 2320 aa14.02□□□□□ -0.16
LRRC28-214ENST00000559433 A0A087WWV3 80 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 GRM6O15303 877 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 HOXA2O43364 376 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 NCK2O43639 380 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 MED24O75448 989 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 DGAT1O75907 488 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 SPATA31C1P0DKV0 1188 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 RARRES1P49788 294 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 NAALADL2Q58DX5 795 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 FERMT3Q86UX7 667 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 CATSPER3Q86XQ3 398 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 ECHDC2Q86YB7 292 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
LRRC28-214ENST00000559433 ADAMTS19Q8TE59 1207 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 PPP2R3CQ969Q6 453 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 UHRF1Q96T88 793 aaPredicted RBP14.02□□□□□ -0.17
LRRC28-214ENST00000559433 POLR3CQ9BUI4 534 aaPredicted RBP14.02□□□□□ -0.17
LRRC28-214ENST00000559433 LMAN2LQ9H0V9 348 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 IFT122Q9HBG6 1241 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 XPNPEP1Q9NQW7 623 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 CHST12Q9NRB3 414 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 PCDHB6Q9Y5E3 794 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.17
LRRC28-214ENST00000559433 XIRP2A4UGR9 3374 aa14.02□□□□□ -0.17
LRRC28-214ENST00000559433 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.17
LRRC28-214ENST00000559433 A0A0U1RQF3 1178 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 ASAP2O43150 1006 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 USO1O60763 962 aaKnown RBP14.01□□□□□ -0.17
LRRC28-214ENST00000559433 CSPG5O95196 566 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 XRCC6P12956 609 aaKnown RBP eCLIP14.01□□□□□ -0.17
LRRC28-214ENST00000559433 PHKA2P46019 1235 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
LRRC28-214ENST00000559433 PTGDRQ13258 359 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 MXD4Q14582 209 aaPredicted RBP14.01□□□□□ -0.17
LRRC28-214ENST00000559433 HAUS3Q68CZ6 603 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 TWF2Q6IBS0 349 aaKnown RBP14.01□□□□□ -0.17
LRRC28-214ENST00000559433 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 SRGAP1Q7Z6B7 1085 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 C4orf32Q8N8J7 132 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 P2RX5Q93086 422 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 TMEM117Q9H0C3 514 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 NSUN3Q9H649 340 aaKnown RBP14.01□□□□□ -0.17
LRRC28-214ENST00000559433 LRWD1Q9UFC0 647 aa14.01□□□□□ -0.17
LRRC28-214ENST00000559433 MYO7AQ13402 2215 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 TNFRSF10AO00220 468 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 EOMESO95936 686 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 SKIP12755 728 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 RPA1P27694 616 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 NCBP1Q09161 790 aaKnown RBP14□□□□□ -0.17
LRRC28-214ENST00000559433 TFDP1Q14186 410 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 RILPL1Q5EBL4 403 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 LRRC43Q8N309 656 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 ASAP3Q8TDY4 903 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 MICAL1Q8TDZ2 1067 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 NACC1Q96RE7 527 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 RAB34Q9BZG1 259 aa14□□□□□ -0.17
LRRC28-214ENST00000559433 POLR3FQ9H1D9 316 aaPredicted RBP14□□□□□ -0.17
LRRC28-214ENST00000559433 UBE2ZQ9H832 354 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms