RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CLTBP09497 229 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 NAMPTP43490 491 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 DNM2P50570 870 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 MRPS6P82932 125 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 MBTPS1Q14703 1052 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 KCNB1Q14721 858 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 DYMQ7RTS9 669 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 METTL13Q8N6R0 699 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 BLZF1Q9H2G9 400 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 PRO3102Q9H379 93 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 SUGCTQ9HAC7 445 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 PARVGQ9HBI0 331 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 ATP11BQ9Y2G3 1177 aa16.39■□□□□ 0.21
SNRPA1-207ENST00000559309 TRIM43BA6NCK2 446 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 VTNP04004 478 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 GAP43P17677 238 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 SCP2P22307 547 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 ITGB8P26012 769 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 NPTX2P47972 431 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 PTENP60484 403 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 RAD51AP2Q09MP3 1159 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 PNOCQ13519 176 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 ZNF618Q5T7W0 954 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 FAM102BQ5T8I3 360 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 EPM2AIP1Q7L775 607 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 KSR1Q8IVT5 923 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 TRIM43Q96BQ3 446 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 MAP7D2Q96T17 732 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 CCDC113Q9H0I3 377 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 WNT8AQ9H1J5 351 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 CDHR5Q9HBB8 845 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 POLD4Q9HCU8 107 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 UMODL1Q5DID0 1318 aa16.38■□□□□ 0.21
SNRPA1-207ENST00000559309 SFI1A8K8P3 1242 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 SELPP16109 830 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 CRYBB1P53674 252 aaPredicted RBP16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 NLRP11P59045 1033 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 COASYQ13057 564 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 BFSP2Q13515 415 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 AMHR2Q16671 573 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 FAM187BQ17R55 369 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 TPRNQ4KMQ1 711 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 COBLL1Q53SF7 1204 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 MAEAQ7L5Y9 396 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 TAS1R3Q7RTX0 852 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 RHPN2Q8IUC4 686 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 CCDC155Q8N6L0 562 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 TMEM161BQ8NDZ6 487 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 TMEM40Q8WWA1 233 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 DPF3Q92784 378 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 GSDMAQ96QA5 445 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 HTATIP2Q9BUP3 242 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 OSBPL7Q9BZF2 842 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 FAM49AQ9H0Q0 323 aaPredicted RBP16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 MINDY3Q9H8M7 445 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 TMEM63CQ9P1W3 806 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 LARSQ9P2J5 1176 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 KCNG1Q9UIX4 513 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 TRPV2Q9Y5S1 764 aa16.37■□□□□ 0.21
SNRPA1-207ENST00000559309 A0A087WZ62 844 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 TRAK2O60296 914 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 TIMP1P01033 207 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 CXCL10P02778 98 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 RPN1P04843 607 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 IQCF3P0C7M6 154 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 DARSP14868 501 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 THPOP40225 353 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 ASIC1P78348 528 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 GTF2BQ00403 316 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 PPP2R5AQ15172 486 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 PCBP1Q15365 356 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 FBXO47Q5MNV8 452 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 FAM43BQ6ZT52 329 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 ZNF720Q7Z2F6 126 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 SFR1Q86XK3 245 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 CCDC65Q8IXS2 484 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 CCDC34Q96HJ3 373 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 FDXACB1Q9BRP7 624 aaPredicted RBP16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 FGFBP2Q9BYJ0 223 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 NUP62CLQ9H1M0 184 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 FZD8Q9H461 694 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 TMEM134Q9H6X4 195 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 PANK4Q9NVE7 773 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 KIAA1468Q9P260 1216 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 NOD1Q9Y239 953 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 AKT3Q9Y243 479 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 CDY2AQ9Y6F7 541 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 SCN5AQ14524 2016 aa16.36■□□□□ 0.21
SNRPA1-207ENST00000559309 TBCAO75347 108 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 FAM13AO94988 1023 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 PARNO95453 639 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 BMP6P22004 513 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 EIF4BP23588 611 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms