RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
CDC42BPB-205ENST00000559245 WEE2P0C1S8 567 aa18.34■□□□□ 0.53
CDC42BPB-205ENST00000559245 TBC1D8BQ0IIM8 1120 aa18.34■□□□□ 0.53
CDC42BPB-205ENST00000559245 KRT32Q14532 448 aa18.34■□□□□ 0.53
CDC42BPB-205ENST00000559245 UGCGQ16739 394 aa18.34■□□□□ 0.53
CDC42BPB-205ENST00000559245 RARS2Q5T160 578 aaKnown RBP18.34■□□□□ 0.53
CDC42BPB-205ENST00000559245 SMOC2Q9H3U7 446 aa18.34■□□□□ 0.53
CDC42BPB-205ENST00000559245 MSH4O15457 936 aa18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 PRPF3O43395 683 aaKnown RBP18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 CSDE1O75534 798 aaKnown RBP18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 FGD1P98174 961 aa18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 VPS52Q8N1B4 723 aa18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 C12orf76Q8N812 135 aaPredicted RBP18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 AUTS2Q8WXX7 1259 aa18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 ZBP1Q9H171 429 aa18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 DZANK1Q9NVP4 752 aa18.33■□□□□ 0.52
CDC42BPB-205ENST00000559245 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 PROB1E7EW31 1015 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 CHMP2AO43633 222 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 EDIL3O43854 480 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 ZC3H11AO75152 810 aaKnown RBP eCLIP18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 ASGR2P07307 311 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 HMGB1P09429 215 aaKnown RBP18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 DRP2Q13474 957 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 TARBP2Q15633 366 aaKnown RBP18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 BMP2KLQ5H9B9 411 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 KIAA1841Q6NSI8 718 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 KANK3Q6NY19 840 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 TMEM173Q86WV6 379 aaPredicted RBP18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 TMEM105Q8N8V8 129 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 TDRD5Q8NAT2 981 aaKnown RBP18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 TMEM87AQ8NBN3 555 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 GCOM2Q9BZD3 368 aaPredicted RBP18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 CHST12Q9NRB3 414 aa18.32■□□□□ 0.52
CDC42BPB-205ENST00000559245 GAS7O60861 476 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 CPA1P15085 419 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 EPCAMP16422 314 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 SFNP31947 248 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 PHKA2P46019 1235 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 JAK3P52333 1124 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 ATAT1Q5SQI0 421 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 Q6ZUG5 572 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 ZDHHC14Q8IZN3 488 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 SLC5A5Q92911 643 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 LPPQ93052 612 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 PHKBQ93100 1093 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 RIT2Q99578 217 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 TEKT3Q9BXF9 490 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 UNC45AQ9H3U1 944 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 LIMD1Q9UGP4 676 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 DBR1Q9UK59 544 aaKnown RBP18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 IRAK3Q9Y616 596 aa18.31■□□□□ 0.52
CDC42BPB-205ENST00000559245 NID2Q14112 1375 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 CTSAP10619 480 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 POLGP54098 1239 aaPredicted RBP18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 CDC42EP1Q00587 391 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 AKAP17AQ02040 695 aaKnown RBP18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 GIT2Q14161 759 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 LONRF3Q496Y0 759 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 MTERF2Q49AM1 385 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 LRCH2Q5VUJ6 765 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 TWF2Q6IBS0 349 aaKnown RBP18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 DDX53Q86TM3 631 aaKnown RBP18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 PLCD3Q8N3E9 789 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 CCDC148Q8NFR7 591 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 SLC22A17Q8WUG5 538 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 RSPH1Q8WYR4 309 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 GJA10Q969M2 543 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 IGSF21Q96ID5 467 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 TRAIPQ9BWF2 469 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 SEPT9Q9UHD8 586 aaPredicted RBP18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 USTQ9Y2C2 406 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 VPS13AQ96RL7 3174 aa18.3■□□□□ 0.52
CDC42BPB-205ENST00000559245 A0A087WZ62 844 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 CARNS1A5YM72 827 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 SFPQP23246 707 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 USP11P51784 963 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 ASTLQ6HA08 431 aaPredicted RBP18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 ASCL5Q7RTU5 278 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 MIER3Q7Z3K6 550 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 BRF1Q92994 677 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 FDXACB1Q9BRP7 624 aaPredicted RBP18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 NIFKQ9BYG3 293 aaKnown RBP18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 MFSD1Q9H3U5 465 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 NRDE2Q9H7Z3 1164 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 TBC1D13Q9NVG8 400 aa18.29■□□□□ 0.52
CDC42BPB-205ENST00000559245 TDRD15B5MCY1 1934 aaKnown RBP18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 MTCL1Q9Y4B5 1905 aaKnown RBP18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 IGKV6-21A0A0C4DH24 114 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 TMEM150BA6NC51 233 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 MEIS3P2A8K0S8 358 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 GALTP07902 379 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 SKIP12755 728 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 NBL1P41271 181 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 DNM2P50570 870 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 NTRK3Q16288 839 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 XKR3Q5GH77 459 aa18.28■□□□□ 0.52
CDC42BPB-205ENST00000559245 NOMO2Q5JPE7 1267 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms