RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 TAF7LQ5H9L4 462 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 TREML2Q5T2D2 321 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 OVOS1Q6IE37 1185 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 KSR2Q6VAB6 950 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 NLRC3Q7RTR2 1065 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 GPRC5AQ8NFJ5 357 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 TRIM43Q96BQ3 446 aaPredicted RBP5.98□□□□□ -1.45
SPG21-208ENST00000558943 ZCCHC4Q9H5U6 513 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 BRMS1Q9HCU9 246 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 CNNM1Q9NRU3 951 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 DDX20Q9UHI6 824 aaKnown RBP5.98□□□□□ -1.45
SPG21-208ENST00000558943 MSRAQ9UJ68 235 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 MAST3O60307 1309 aa5.98□□□□□ -1.45
SPG21-208ENST00000558943 RPAP1Q9BWH6 1393 aaPredicted RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 PI4K2BG5E9Z4 385 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 ELL2O00472 640 aaPredicted RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 TNFRSF10CO14798 259 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 CTNND1O60716 968 aaKnown RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 GLRX3O76003 335 aaKnown RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 PRAMEF1O95521 474 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 IGKV5-2P06315 115 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 SYPP08247 313 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 MAPK4P31152 587 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 ZNF165P49910 485 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 EPHB4P54760 987 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 NHLH1Q02575 133 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 TRIM60Q495X7 471 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 CAVIN4Q5BKX8 364 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 GJC2Q5T442 439 aaPredicted RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 CCDC174Q6PII3 467 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 HHIPL2Q6UWX4 724 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 LDHAL6AQ6ZMR3 332 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 HS2ST1Q7LGA3 356 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 TMC3Q7Z5M5 1100 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 HERVK_113Q902F9 699 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 RELTQ969Z4 430 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 EDC3Q96F86 508 aaKnown RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 FAM84BQ96KN1 310 aaPredicted RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 SLC28A3Q9HAS3 691 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 PDLIM7Q9NR12 457 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 CHST7Q9NS84 486 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 TAF6LQ9Y6J9 622 aa5.97□□□□□ -1.45
SPG21-208ENST00000558943 LAMA2P24043 3122 aaKnown RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 MYBBP1AQ9BQG0 1328 aaKnown RBP5.97□□□□□ -1.45
SPG21-208ENST00000558943 DDX60LQ5H9U9 1706 aaKnown RBP5.96□□□□□ -1.45
SPG21-208ENST00000558943 PIEZO1Q92508 2521 aa5.96□□□□□ -1.45
SPG21-208ENST00000558943 A0A1W2PQ45 241 aaPredicted RBP5.96□□□□□ -1.46
SPG21-208ENST00000558943 A0A1W2PQY0 241 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 PI4KAP2A4QPH2 592 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 FADS2P1A8MWK0 482 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 ERC2O15083 957 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 TLR3O15455 904 aaKnown RBP5.96□□□□□ -1.46
SPG21-208ENST00000558943 MPOP05164 745 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 CLTBP09497 229 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 BMP7P18075 431 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 ZEB1P37275 1124 aaPredicted RBP5.96□□□□□ -1.46
SPG21-208ENST00000558943 ADCYAP1R1P41586 468 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 TMPOP42166 694 aaKnown RBP5.96□□□□□ -1.46
SPG21-208ENST00000558943 IRX3P78415 501 aaPredicted RBP5.96□□□□□ -1.46
SPG21-208ENST00000558943 TLE2Q04725 743 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 SPP2Q13103 211 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 UBE4AQ14139 1066 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 CCL14Q16627 93 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 CCDC57Q2TAC2 916 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 ERICH6BQ5W0A0 696 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 PI4KAP1Q8N8J0 262 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 FERMT2Q96AC1 680 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 ATG4CQ96DT6 458 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 PLA2G12BQ9BX93 195 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 KCNH6Q9H252 994 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 USP40Q9NVE5 1235 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 RTEL1Q9NZ71 1219 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 MORF4L1Q9UBU8 362 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 SUGT1Q9Y2Z0 365 aa5.96□□□□□ -1.46
SPG21-208ENST00000558943 ALPK3Q96L96 1907 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 CACNA1AO00555 2505 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 OTOFQ9HC10 1997 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 GRXCR1A8MXD5 290 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 ZNF205O95201 554 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 ALADP13716 330 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 GCKRQ14397 625 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 RAB30Q15771 203 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 CCDC27Q2M243 656 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 CCDC30Q5VVM6 783 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 CDC42EP5Q6NZY7 148 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 PLEKHH3Q7Z736 793 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 USP6NLQ92738 828 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 DACT3Q96B18 629 aaPredicted RBP5.95□□□□□ -1.46
SPG21-208ENST00000558943 C20orf173Q96LM9 149 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 APBA2Q99767 749 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 PRDM14Q9GZV8 571 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 MYH16Q9H6N6 1097 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.95□□□□□ -1.46
SPG21-208ENST00000558943 COG5Q9UP83 839 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 PCDHB12Q9Y5F1 795 aa5.95□□□□□ -1.46
SPG21-208ENST00000558943 KIAA0355O15063 1070 aa5.94□□□□□ -1.46
SPG21-208ENST00000558943 IMPDH2P12268 514 aa5.94□□□□□ -1.46
SPG21-208ENST00000558943 NME1P15531 152 aaKnown RBP5.94□□□□□ -1.46
SPG21-208ENST00000558943 PI3P19957 117 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms