RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 ATF7P17544 494 aaPredicted RBP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 SFPQP23246 707 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 YWHABP31946 246 aaKnown RBP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 POLGP54098 1239 aaPredicted RBP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 CYP4A11Q02928 519 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 UBE3AQ05086 875 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 DLX2Q07687 328 aaPredicted RBP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 CTTNQ14247 550 aaKnown RBP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 CALCRLQ16602 461 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 CSPP1Q1MSJ5 1256 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 CLLU1OSQ5K130 101 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 LRRC55Q6ZSA7 311 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 ZNF598Q86UK7 904 aaKnown RBP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 CCDC83Q8IWF9 413 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 THNSL1Q8IYQ7 743 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 ABI1Q8IZP0 508 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 LRRC43Q8N309 656 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 SLC7A3Q8WY07 619 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 PPP2R3CQ969Q6 453 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 DHX33Q9H6R0 707 aaKnown RBP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
SMAD6-203ENST00000558937 DACT1Q9NYF0 836 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 LIMCH1Q9UPQ0 1083 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 PPME1Q9Y570 386 aa16.9■□□□□ 0.3
SMAD6-203ENST00000558937 RFC5P40937 340 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 GUCY1B3Q02153 619 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 CLUL1Q15846 466 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 C8orf34Q49A92 452 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 KHSRPQ92945 711 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMAD6-203ENST00000558937 INO80BQ9C086 356 aaPredicted RBP16.89■□□□□ 0.29
SMAD6-203ENST00000558937 EPHX3Q9H6B9 360 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 ZSWIM4Q9H7M6 989 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 CHST12Q9NRB3 414 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 PIN4Q9Y237 131 aaKnown RBP16.89■□□□□ 0.29
SMAD6-203ENST00000558937 COL4A3BPQ9Y5P4 624 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 BDP1A6H8Y1 2624 aa16.89■□□□□ 0.29
SMAD6-203ENST00000558937 ZBTB39O15060 712 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 NEMFO60524 1076 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 EOMESO95936 686 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 NRIP1P48552 1158 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 ADAM15Q13444 863 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 EMC2Q15006 297 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 XKR9Q5GH70 373 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 TWF2Q6IBS0 349 aaKnown RBP16.88■□□□□ 0.29
SMAD6-203ENST00000558937 OTUD6AQ7L8S5 288 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 CATSPER4Q7RTX7 472 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 EXOC8Q8IYI6 725 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 GJD3Q8N144 294 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 HELQQ8TDG4 1101 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 PSPC1Q8WXF1 523 aaKnown RBP16.88■□□□□ 0.29
SMAD6-203ENST00000558937 TMEM143Q96AN5 459 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 EIF2AK1Q9BQI3 630 aaKnown RBP16.88■□□□□ 0.29
SMAD6-203ENST00000558937 IFT122Q9HBG6 1241 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 TLR9Q9NR96 1032 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 FAM50BQ9Y247 325 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 XIRP2A4UGR9 3374 aa16.88■□□□□ 0.29
SMAD6-203ENST00000558937 FSCN2O14926 492 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 SLITRK3O94933 977 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 PBX3P40426 434 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 PHKA2P46019 1235 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 NDUFV1P49821 464 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 ERVFC1P60507 584 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 KCNT2Q6UVM3 1135 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 RBM23Q86U06 439 aaKnown RBP16.87■□□□□ 0.29
SMAD6-203ENST00000558937 TPH2Q8IWU9 490 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 EFHBQ8N7U6 833 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 MICAL1Q8TDZ2 1067 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 PRPF31Q8WWY3 499 aaKnown RBP16.87■□□□□ 0.29
SMAD6-203ENST00000558937 MRPS27Q92552 414 aaKnown RBP16.87■□□□□ 0.29
SMAD6-203ENST00000558937 ZNF558Q96NG5 402 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 KIF2CQ99661 725 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 TRAIPQ9BWF2 469 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 TTC12Q9H892 705 aaPredicted RBP16.87■□□□□ 0.29
SMAD6-203ENST00000558937 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
SMAD6-203ENST00000558937 MBTPS2O43462 519 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 GAS2O43903 313 aaKnown RBP16.86■□□□□ 0.29
SMAD6-203ENST00000558937 LYPLA2O95372 231 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 ATP2B1P20020 1258 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 SSTR3P32745 418 aaPredicted RBP16.86■□□□□ 0.29
SMAD6-203ENST00000558937 PPM1AP35813 382 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 TXKP42681 527 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 SMAD4Q13485 552 aaKnown RBP16.86■□□□□ 0.29
SMAD6-203ENST00000558937 SAFBQ15424 915 aaKnown RBP eCLIP16.86■□□□□ 0.29
SMAD6-203ENST00000558937 TCP11Q8WWU5 503 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 LPPQ93052 612 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 C8orf76Q96K31 380 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 MTMR9Q96QG7 549 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 MTRQ99707 1265 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 LLPHQ9BRT6 129 aaKnown RBP16.86■□□□□ 0.29
SMAD6-203ENST00000558937 C1QTNF1Q9BXJ1 281 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 MRPL9Q9BYD2 267 aaKnown RBP16.86■□□□□ 0.29
SMAD6-203ENST00000558937 TMEM60Q9H2L4 133 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 XPNPEP1Q9NQW7 623 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 AGPAT5Q9NUQ2 364 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 FAM105AQ9NUU6 356 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 CD207Q9UJ71 328 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 LZTS1Q9Y250 596 aa16.86■□□□□ 0.29
SMAD6-203ENST00000558937 POTEMA6NI47 508 aa16.85■□□□□ 0.29
SMAD6-203ENST00000558937 GLP2RO95838 553 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms