RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CPLX2Q6PUV4 134 aaKnown RBP15.22■□□□□ 0.03
VPS18-203ENST00000558855 THNSL1Q8IYQ7 743 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 NSUN7Q8NE18 718 aaKnown RBP15.22■□□□□ 0.03
VPS18-203ENST00000558855 BCL7CQ8WUZ0 217 aaPredicted RBP15.22■□□□□ 0.03
VPS18-203ENST00000558855 GTF3C6Q969F1 213 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 SCLT1Q96NL6 688 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 MINDY3Q9H8M7 445 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 TLR9Q9NR96 1032 aa15.22■□□□□ 0.03
VPS18-203ENST00000558855 SUCLA2Q9P2R7 463 aaPredicted RBP15.22■□□□□ 0.03
VPS18-203ENST00000558855 TECTAO75443 2155 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 WDFY4Q6ZS81 3184 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 PLXNA3P51805 1871 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 DENND4AQ7Z401 1863 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 A0A0U1RQF3 1178 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 NT5C1B-RDH14C9J2C7 533 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 CCNT1O60563 726 aaKnown RBP15.21■□□□□ 0.03
VPS18-203ENST00000558855 EYA4O95677 639 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 AFF1P51825 1210 aaKnown RBP15.21■□□□□ 0.03
VPS18-203ENST00000558855 PSMC5P62195 406 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 DUSP6Q16828 381 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 ODR4Q5SWX8 454 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 PPP4R3AQ6IN85 833 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 KCNT2Q6UVM3 1135 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 SMRP1Q8NCR6 262 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 TMEM143Q96AN5 459 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 DYDC2Q96IM9 177 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 NLRP4Q96MN2 994 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 IFT122Q9HBG6 1241 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 CYP26B1Q9NR63 512 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 PCDHB12Q9Y5F1 795 aa15.21■□□□□ 0.03
VPS18-203ENST00000558855 TDRD15B5MCY1 1934 aaKnown RBP15.21■□□□□ 0.02
VPS18-203ENST00000558855 KMT2EQ8IZD2 1858 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 C2orf16Q68DN1 1984 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 NEFLP07196 543 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 LAG3P18627 525 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 QARSP47897 775 aaKnown RBP15.2■□□□□ 0.02
VPS18-203ENST00000558855 ANAPC15P60006 121 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 CYP4A11Q02928 519 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 CTTNQ14247 550 aaKnown RBP15.2■□□□□ 0.02
VPS18-203ENST00000558855 NCAPH2Q6IBW4 605 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 FAM177A1Q8N128 213 aaPredicted RBP15.2■□□□□ 0.02
VPS18-203ENST00000558855 SLC39A11Q8N1S5 342 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
VPS18-203ENST00000558855 LXNQ9BS40 222 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 TLE6Q9H808 572 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 XPNPEP1Q9NQW7 623 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 PRKAG3Q9UGI9 489 aa15.2■□□□□ 0.02
VPS18-203ENST00000558855 USP15Q9Y4E8 981 aaPredicted RBP15.2■□□□□ 0.02
VPS18-203ENST00000558855 A0A087WWV3 80 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 NCK2O43639 380 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 CDKL5O76039 1030 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 ZSCAN20P17040 1043 aaPredicted RBP15.19■□□□□ 0.02
VPS18-203ENST00000558855 PHKA2P46019 1235 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 PLCB3Q01970 1234 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 UBE3AQ05086 875 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 COASYQ13057 564 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 LRRC43Q8N309 656 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 TCF25Q9BQ70 676 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 APOL5Q9BWW9 433 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 VN1R3Q9BXE9 311 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 GCOM2Q9BZD3 368 aaPredicted RBP15.19■□□□□ 0.02
VPS18-203ENST00000558855 DHX33Q9H6R0 707 aaKnown RBP15.19■□□□□ 0.02
VPS18-203ENST00000558855 MUTYHQ9UIF7 546 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 PIN4Q9Y237 131 aaKnown RBP15.19■□□□□ 0.02
VPS18-203ENST00000558855 ZNF318Q5VUA4 2279 aa15.19■□□□□ 0.02
VPS18-203ENST00000558855 BTBD18B2RXH4 712 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 DCXO43602 365 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 GCFC2P16383 781 aaKnown RBP15.18■□□□□ 0.02
VPS18-203ENST00000558855 PLA2G5P39877 138 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 EPHA7Q15375 998 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 UBXN11Q5T124 520 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 LLGL2Q6P1M3 1020 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 SYCE2Q6PIF2 218 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 RNF135Q8IUD6 432 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 MICAL1Q8TDZ2 1067 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 PRPF31Q8WWY3 499 aaKnown RBP15.18■□□□□ 0.02
VPS18-203ENST00000558855 AUTS2Q8WXX7 1259 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 CEP170P1Q96L14 293 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 ZNF558Q96NG5 402 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 AAASQ9NRG9 546 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 DNAJB4Q9UDY4 337 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 COL4A3BPQ9Y5P4 624 aa15.18■□□□□ 0.02
VPS18-203ENST00000558855 P4HBP07237 508 aaKnown RBP15.17■□□□□ 0.02
VPS18-203ENST00000558855 HOXA11P31270 313 aaPredicted RBP15.17■□□□□ 0.02
VPS18-203ENST00000558855 KRT2P35908 639 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 BCAR1P56945 870 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 GUCY1B3Q02153 619 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 KANK3Q6NY19 840 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 AGMOQ6ZNB7 445 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 ZNF410Q86VK4 478 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 C4orf19Q8IY42 314 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 SUSD6Q92537 303 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 S1PR5Q9H228 398 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 TMEM60Q9H2L4 133 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 NRDE2Q9H7Z3 1164 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 AGPAT5Q9NUQ2 364 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 FAM105AQ9NUU6 356 aa15.17■□□□□ 0.02
VPS18-203ENST00000558855 LZTS1Q9Y250 596 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms