RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ARID2Q68CP9 1835 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 ARHGEF35A5YM69 484 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 EPOPA6NHQ4 379 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 ZSCAN22P10073 491 aaPredicted RBP15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 GLRA2P23416 452 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 TAP1Q03518 808 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 FAM102BQ5T8I3 360 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 EXOC8Q8IYI6 725 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 RNF149Q8NC42 400 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 LRRC15Q8TF66 581 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 TCP11Q8WWU5 503 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 CHAMP1Q96JM3 812 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 FTHL17Q9BXU8 183 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 CSRNP2Q9H175 543 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 RGS18Q9NS28 235 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
TSPAN3-205ENST00000558745 CDH23Q9H251 3354 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 DENND3A2RUS2 1198 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 LINC01553A4QN01 128 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 F13A1P00488 732 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 CYP11B2P19099 503 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 PLA2G5P39877 138 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 HTRA4P83105 476 aaPredicted RBP15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 CDC42EP1Q00587 391 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 CAPSQ13938 189 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 CABP7Q86V35 215 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 ZNF410Q86VK4 478 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 CRIPAKQ8N1N5 446 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 BSNDQ8WZ55 320 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 FAM122AQ96E09 287 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 EPSTI1Q96J88 318 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 YME1L1Q96TA2 773 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 DNM3Q9UQ16 869 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 ZDHHC9Q9Y397 364 aa15.37■□□□□ 0.05
TSPAN3-205ENST00000558745 TTC3P53804 2025 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 C9IYK1 514 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 EYA4O95677 639 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 MUTP22033 750 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 KARSQ15046 597 aaKnown RBP15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 LONRF3Q496Y0 759 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 CATSPER4Q7RTX7 472 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 ARNTL2Q8WYA1 636 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 C17orf80Q9BSJ5 609 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 INSL6Q9Y581 213 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 STK24Q9Y6E0 443 aa15.36■□□□□ 0.05
TSPAN3-205ENST00000558745 TTC28Q96AY4 2481 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 ASAP2O43150 1006 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 GAS2O43903 313 aaKnown RBP15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 DGKIO75912 1065 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 BMP15O95972 392 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 SSBP05455 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 ZSCAN20P17040 1043 aaPredicted RBP15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 UBA7P41226 1012 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 SARSP49591 514 aaKnown RBP15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 FAM189BP81408 668 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 RAD51AP2Q09MP3 1159 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 ADGRE1Q14246 886 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 DHX8Q14562 1220 aaKnown RBP15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 SLC39A14Q15043 492 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 PAN2Q504Q3 1202 aaKnown RBP15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 ODR4Q5SWX8 454 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 HYIQ5T013 277 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 RINT1Q6NUQ1 792 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 SLC24A5Q71RS6 500 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 RUSC1Q9BVN2 902 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 LRFN2Q9ULH4 789 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 USP20Q9Y2K6 914 aa15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 SRPRBQ9Y5M8 271 aaKnown RBP15.35■□□□□ 0.05
TSPAN3-205ENST00000558745 EYSQ5T1H1 3165 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 TMEM265A0A087WTH1 108 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 NPHP3-ACAD11A0A0J9YXS1 232 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 SFI1A8K8P3 1242 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 INO80B-WBP1J3KQ70 363 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 FGFR1P11362 822 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 LONP1P36776 959 aaKnown RBP15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 PTENP60484 403 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 MXD4Q14582 209 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 STK38Q15208 465 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 TMEM119Q4V9L6 283 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 SRGAP1Q7Z6B7 1085 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 NPAS4Q8IUM7 802 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 RNF169Q8NCN4 708 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 LINC00301Q8NCQ3 95 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 SP7Q8TDD2 431 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 ZNF689Q96CS4 500 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 CPB2Q96IY4 423 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 CDK5RAP3Q96JB5 506 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 AK8Q96MA6 479 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 KIFC3Q9BVG8 833 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 PANK2Q9BZ23 570 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 INO80BQ9C086 356 aaPredicted RBP15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 RC3H2Q9HBD1 1191 aaKnown RBP15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 PIN4Q9Y237 131 aaKnown RBP15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 PCDHB7Q9Y5E2 793 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 MUC3AQ02505 3323 aa15.34■□□□□ 0.05
TSPAN3-205ENST00000558745 LRRIQ4A6NIV6 560 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms