RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 PCDHB12Q9Y5F1 795 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 PCDHGC5Q9Y5F6 944 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 MYO15AQ9UKN7 3530 aa12.96□□□□□ -0.33
CASC4-205ENST00000558735 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.34
CASC4-205ENST00000558735 KMT2EQ8IZD2 1858 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 GFRA3O60609 400 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 FDPSP14324 419 aaKnown RBP12.95□□□□□ -0.34
CASC4-205ENST00000558735 ZSCAN20P17040 1043 aaPredicted RBP12.95□□□□□ -0.34
CASC4-205ENST00000558735 ERVFC1P60507 584 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 SPOUT1Q5T280 376 aaKnown RBP12.95□□□□□ -0.34
CASC4-205ENST00000558735 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 ANO5Q75V66 913 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 RBM23Q86U06 439 aaKnown RBP12.95□□□□□ -0.34
CASC4-205ENST00000558735 ECHDC2Q86YB7 292 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 COLGALT1Q8NBJ5 622 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 TMEM117Q9H0C3 514 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 KCNMB3Q9NPA1 279 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
CASC4-205ENST00000558735 A0A0U1RQF3 1178 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 CCDC194A0A1B0GVG4 234 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 MAFO75444 373 aaPredicted RBP12.94□□□□□ -0.34
CASC4-205ENST00000558735 CDKL5O76039 1030 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 FGF18O76093 207 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 AVPR2P30518 371 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 NRIP1P48552 1158 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 AK2P54819 239 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 ANAPC15P60006 121 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 PSMC5P62195 406 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 CDC42EP1Q00587 391 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 UBE3AQ05086 875 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 PPP2R5CQ13362 524 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 EARS2Q5JPH6 523 aaKnown RBP12.94□□□□□ -0.34
CASC4-205ENST00000558735 TMEM184AQ6ZMB5 413 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 NECAB1Q8N987 351 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
CASC4-205ENST00000558735 MICAL1Q8TDZ2 1067 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 HAS1Q92839 578 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 CDCA3Q99618 268 aaPredicted RBP12.94□□□□□ -0.34
CASC4-205ENST00000558735 ORC3Q9UBD5 711 aaPredicted RBP12.94□□□□□ -0.34
CASC4-205ENST00000558735 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
CASC4-205ENST00000558735 VAV3Q9UKW4 847 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 WDR81Q562E7 1941 aa12.94□□□□□ -0.34
CASC4-205ENST00000558735 STK36Q9NRP7 1315 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 A0A087WZ62 844 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 PER2O15055 1255 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 EOMESO95936 686 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 QARSP47897 775 aaKnown RBP12.93□□□□□ -0.34
CASC4-205ENST00000558735 DNM2P50570 870 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 VCPP55072 806 aaKnown RBP12.93□□□□□ -0.34
CASC4-205ENST00000558735 NPEPPSP55786 919 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 ME3Q16798 604 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 PTPN21Q16825 1174 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 CLLU1OSQ5K130 101 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 NEK8Q86SG6 692 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
CASC4-205ENST00000558735 KSR1Q8IVT5 923 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 NLRP7Q8WX94 980 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 FDXACB1Q9BRP7 624 aaPredicted RBP12.93□□□□□ -0.34
CASC4-205ENST00000558735 GCOM2Q9BZD3 368 aaPredicted RBP12.93□□□□□ -0.34
CASC4-205ENST00000558735 TLE6Q9H808 572 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
CASC4-205ENST00000558735 WRAP73Q9P2S5 460 aaPredicted RBP12.93□□□□□ -0.34
CASC4-205ENST00000558735 BARX2Q9UMQ3 279 aaPredicted RBP12.93□□□□□ -0.34
CASC4-205ENST00000558735 DCHS1Q96JQ0 3298 aa12.93□□□□□ -0.34
CASC4-205ENST00000558735 FAM205CA6NFA0 338 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 HOXA2O43364 376 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 CCNT1O60563 726 aaKnown RBP12.92□□□□□ -0.34
CASC4-205ENST00000558735 P4HBP07237 508 aaKnown RBP12.92□□□□□ -0.34
CASC4-205ENST00000558735 GCFC2P16383 781 aaKnown RBP12.92□□□□□ -0.34
CASC4-205ENST00000558735 XBP1P17861 261 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 RBM10P98175 930 aaKnown RBP12.92□□□□□ -0.34
CASC4-205ENST00000558735 PLCB3Q01970 1234 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 NR5A1Q13285 461 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 KCNC3Q14003 757 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 ANKRD1Q15327 319 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 FNDC1Q4ZHG4 1894 aaPredicted RBP12.92□□□□□ -0.34
CASC4-205ENST00000558735 PLA2G4FQ68DD2 849 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 PDE12Q6L8Q7 609 aaKnown RBP12.92□□□□□ -0.34
CASC4-205ENST00000558735 KCNT2Q6UVM3 1135 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 RHPN2Q8IUC4 686 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 THNSL1Q8IYQ7 743 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 SCLT1Q96NL6 688 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 CYP26B1Q9NR63 512 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 TLR9Q9NR96 1032 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 CHST12Q9NRB3 414 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 RGL1Q9NZL6 768 aa12.92□□□□□ -0.34
CASC4-205ENST00000558735 FSCN2O14926 492 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 ZBTB39O15060 712 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 TBX3O15119 743 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 LARGE1O95461 756 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 LAG3P18627 525 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 PBX3P40426 434 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 EPHA7Q15375 998 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 DUSP6Q16828 381 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 ERICH6BQ5W0A0 696 aa12.91□□□□□ -0.34
CASC4-205ENST00000558735 RNF169Q8NCN4 708 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms