RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PYM1Q9BRP8 204 aaKnown RBP19.32■□□□□ 0.68
TPM1-214ENST00000558544 TIPINQ9BVW5 301 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 CUEDC2Q9H467 287 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 AGO3Q9H9G7 860 aaKnown RBP19.32■□□□□ 0.68
TPM1-214ENST00000558544 SERTAD1Q9UHV2 236 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 NOC2LQ9Y3T9 749 aaKnown RBP19.32■□□□□ 0.68
TPM1-214ENST00000558544 RANBP2P49792 3224 aaKnown RBP19.32■□□□□ 0.68
TPM1-214ENST00000558544 CSDE1O75534 798 aaKnown RBP19.32■□□□□ 0.68
TPM1-214ENST00000558544 PFKMP08237 780 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 CD52P31358 61 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 TFDP1Q14186 410 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 TCTN1Q2MV58 587 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 PLEKHG4Q58EX7 1191 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 C16orf59Q7L2K0 433 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 DYMQ7RTS9 669 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 DRC1Q96MC2 740 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.32■□□□□ 0.681e-6■□□□□ 10.6
TPM1-214ENST00000558544 IFIH1Q9BYX4 1025 aaKnown RBP19.32■□□□□ 0.68
TPM1-214ENST00000558544 GCOM2Q9BZD3 368 aaPredicted RBP19.32■□□□□ 0.68
TPM1-214ENST00000558544 IFT122Q9HBG6 1241 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 SQORQ9Y6N5 450 aa19.32■□□□□ 0.68
TPM1-214ENST00000558544 MYMKA6NI61 221 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 LRRIQ4A6NIV6 560 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 SFI1A8K8P3 1242 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 ACTN4O43707 911 aaKnown RBP19.31■□□□□ 0.68
TPM1-214ENST00000558544 RPS6KA5O75582 802 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 DARSP14868 501 aaKnown RBP19.31■□□□□ 0.68
TPM1-214ENST00000558544 EIF4BP23588 611 aaKnown RBP19.31■□□□□ 0.68
TPM1-214ENST00000558544 PAK2Q13177 524 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 GIT2Q14161 759 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 PSRC1Q6PGN9 363 aaPredicted RBP19.31■□□□□ 0.68
TPM1-214ENST00000558544 CHRDL2Q6WN34 429 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 CLEC17AQ6ZS10 378 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 FAM228AQ86W67 206 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 DBF4BQ8NFT6 615 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 IFT74Q96LB3 600 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 UBE2OQ9C0C9 1292 aaKnown RBP19.31■□□□□ 0.68
TPM1-214ENST00000558544 TNMDQ9H2S6 317 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 KBTBD4Q9NVX7 518 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 ODF2LQ9ULJ1 636 aa19.31■□□□□ 0.68
TPM1-214ENST00000558544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.3■□□□□ 0.68
TPM1-214ENST00000558544 FGFR4P22455 802 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 PHKA2P46019 1235 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 PEX3P56589 373 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 LONRF3Q496Y0 759 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 TMEM240Q5SV17 173 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 CNKSR3Q6P9H4 555 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 ZNF365Q70YC5 407 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 CEP57L1Q8IYX8 460 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 USP38Q8NB14 1042 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 SEPT8Q92599 483 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 DDX12PQ92771 950 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 GBP4Q96PP9 640 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 MAGEF1Q9HAY2 307 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 PADI3Q9ULW8 664 aa19.3■□□□□ 0.68
TPM1-214ENST00000558544 GBF1Q92538 1859 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 TBCAO75347 108 aaKnown RBP19.29■□□□□ 0.68
TPM1-214ENST00000558544 PRPF40AO75400 957 aaKnown RBP19.29■□□□□ 0.68
TPM1-214ENST00000558544 FAM13AO94988 1023 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 FGBP02675 491 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 NAMPTP43490 491 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 PTENP60484 403 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 NFX1Q12986 1120 aaKnown RBP19.29■□□□□ 0.68
TPM1-214ENST00000558544 DMP1Q13316 513 aaPredicted RBP19.29■□□□□ 0.68
TPM1-214ENST00000558544 PPP2R5AQ15172 486 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 C9orf50Q5SZB4 431 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 OTOP2Q7RTS6 562 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 GRAMD1CQ8IYS0 662 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 KIFC3Q9BVG8 833 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 ZHX3Q9H4I2 956 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 MINDY3Q9H8M7 445 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 ERVK-5Q9HDB9 667 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 ST3GAL5Q9UNP4 418 aa19.29■□□□□ 0.68
TPM1-214ENST00000558544 ADGRA3Q8IWK6 1321 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 ZNF202O95125 648 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 SLFN14P0C7P3 912 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 SFPQP23246 707 aaKnown RBP eCLIP19.28■□□□□ 0.68
TPM1-214ENST00000558544 AFMP43652 599 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 PRPF38BQ5VTL8 546 aaKnown RBP19.28■□□□□ 0.68
TPM1-214ENST00000558544 SRGAP1Q7Z6B7 1085 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 DEPTORQ8TB45 409 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 APBB2Q92870 758 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 DNAJC19Q96DA6 116 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 INO80BQ9C086 356 aaPredicted RBP19.28■□□□□ 0.68
TPM1-214ENST00000558544 USP25Q9UHP3 1055 aa19.28■□□□□ 0.68
TPM1-214ENST00000558544 LAMA2P24043 3122 aaKnown RBP19.27■□□□□ 0.68
TPM1-214ENST00000558544 CCDC169A6NNP5 214 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 INO80B-WBP1J3KQ70 363 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 GPR182O15218 404 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 ACTN1P12814 892 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 PLS3P13797 630 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 LIG1P18858 919 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 CASP1P29466 404 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 BMP8BP34820 402 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 NPTX2P47972 431 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 UBE2HP62256 183 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 AMPD3Q01432 767 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 MBTD1Q05BQ5 628 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 FAM160A1Q05DH4 1040 aa19.27■□□□□ 0.68
TPM1-214ENST00000558544 POU5F1BQ06416 359 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms