RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CEBPZQ03701 1054 aaKnown RBP11.46□□□□□ -0.57
TPM1-212ENST00000558347 LETM2Q2VYF4 491 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 MOXD1Q6UVY6 613 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 CCDC186Q7Z3E2 898 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 RTN4RL1Q86UN2 441 aaPredicted RBP11.46□□□□□ -0.57
TPM1-212ENST00000558347 PPP1R16BQ96T49 567 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 YME1L1Q96TA2 773 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 RC3H2Q9HBD1 1191 aaKnown RBP11.46□□□□□ -0.57
TPM1-212ENST00000558347 DDX25Q9UHL0 483 aaKnown RBP11.46□□□□□ -0.57
TPM1-212ENST00000558347 PADI3Q9ULW8 664 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 PCDHA7Q9UN72 937 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 SQORQ9Y6N5 450 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 NLRC5Q86WI3 1866 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 MUC3AQ02505 3323 aa11.46□□□□□ -0.57
TPM1-212ENST00000558347 CUL9Q8IWT3 2517 aa11.46□□□□□ -0.58
TPM1-212ENST00000558347 OATP04181 439 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 SFNP31947 248 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 JAK3P52333 1124 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 PRKCEQ02156 737 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 SYCP1Q15431 976 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 TMEM266Q2M3C6 531 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 MIER3Q7Z3K6 550 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 NEK8Q86SG6 692 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 LINC01465Q8N7H1 131 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 TMEM40Q8WWA1 233 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 TIGD1Q96MW7 591 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 NAP1L4Q99733 375 aaKnown RBP11.45□□□□□ -0.58
TPM1-212ENST00000558347 TMX1Q9H3N1 280 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 KCND1Q9NSA2 647 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 THEGQ9P2T0 379 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 GINS2Q9Y248 185 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 TTC3P53804 2025 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 BECN2A8MW95 431 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 VTNP04004 478 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 CLCN3P51790 818 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 GSDMDP57764 484 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 RBM10P98175 930 aaKnown RBP11.45□□□□□ -0.58
TPM1-212ENST00000558347 PAK2Q13177 524 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 KIZQ2M2Z5 673 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 C11orf57Q6ZUT1 292 aaPredicted RBP11.45□□□□□ -0.58
TPM1-212ENST00000558347 CRIPAKQ8N1N5 446 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 LRRC71Q8N4P6 559 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 METTL13Q8N6R0 699 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 FAM167AQ96KS9 214 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 KCNMB3Q9NPA1 279 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 IMPACTQ9P2X3 320 aa11.45□□□□□ -0.58
TPM1-212ENST00000558347 NOC2LQ9Y3T9 749 aaKnown RBP11.45□□□□□ -0.58
TPM1-212ENST00000558347 RALGAPA2Q2PPJ7 1873 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 FAM237AA0A1B0GTK4 181 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 TMEM150BA6NC51 233 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 EML1O00423 815 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 LAD1O00515 517 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 WNT7AO00755 349 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 MGEA5O60502 916 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 CCNT1O60563 726 aaKnown RBP11.44□□□□□ -0.58
TPM1-212ENST00000558347 CUTAO60888 179 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 GPR32O75388 356 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 STBD1O95210 358 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 LINC00271P0C7V0 271 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 ATP2B1P20020 1258 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 CMA1P23946 247 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 ATP2C1P98194 919 aaPredicted RBP11.44□□□□□ -0.58
TPM1-212ENST00000558347 EPC2Q52LR7 807 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 AXDND1Q5T1B0 1012 aaPredicted RBP11.44□□□□□ -0.58
TPM1-212ENST00000558347 PPP4R3AQ6IN85 833 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 DHX40Q8IX18 779 aaKnown RBP11.44□□□□□ -0.58
TPM1-212ENST00000558347 C17orf53Q8N3J3 647 aaPredicted RBP11.44□□□□□ -0.58
TPM1-212ENST00000558347 FBXO22Q8NEZ5 403 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 RDM1Q8NG50 284 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 ZNF689Q96CS4 500 aaPredicted RBP11.44□□□□□ -0.58
TPM1-212ENST00000558347 OSMRQ99650 979 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 FTHL17Q9BXU8 183 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
TPM1-212ENST00000558347 ERVK-5Q9HDB9 667 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 NRBP2Q9NSY0 501 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 KIAA1468Q9P260 1216 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 VAV3Q9UKW4 847 aa11.44□□□□□ -0.58
TPM1-212ENST00000558347 SRPRBQ9Y5M8 271 aaKnown RBP11.44□□□□□ -0.58
TPM1-212ENST00000558347 ADGRA3Q8IWK6 1321 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 SMTNL1A8MU46 457 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 MAGEB2O15479 319 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 CTIFO43310 598 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 RPS6KA5O75582 802 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 GCFC2P16383 781 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 TPM4P67936 248 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 TFF2Q03403 129 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 NFX1Q12986 1120 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 SKIV2LQ15477 1246 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 ZRSR1Q15695 479 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 ZNF174Q15697 407 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 ARL6IP4Q66PJ3 421 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 EFCAB12Q6NXP0 572 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 TMEM192Q8IY95 271 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 C4orf32Q8N8J7 132 aa11.43□□□□□ -0.58
TPM1-212ENST00000558347 KRI1Q8N9T8 703 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
TPM1-212ENST00000558347 BANK1Q8NDB2 785 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms