RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ZNF543Q08ER8 600 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 COASYQ13057 564 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ADAM9Q13443 819 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 E2F5Q15329 346 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 VPS72Q15906 364 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 BMT2Q1RMZ1 405 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ASTE1Q2TB18 679 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ZCWPW2Q504Y3 356 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 HERC4Q5GLZ8 1057 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 AGBL2Q5U5Z8 902 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 FAAH2Q6GMR7 532 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 PPP1R2P3Q6NXS1 205 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 HHIPL2Q6UWX4 724 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 LRRC55Q6ZSA7 311 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 TUBA1AQ71U36 451 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 H2AFVQ71UI9 128 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 HS2ST1Q7LGA3 356 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 USP17L1Q7RTZ2 530 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ZBTB8BQ8NAP8 495 aaPredicted RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 KIAA0895Q8NCT3 520 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 NEK9Q8TD19 979 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 BCAS4Q8TDM0 211 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ZNF384Q8TF68 577 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 DYDC1Q8WWB3 177 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 MAIP1Q8WWC4 291 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 SREK1Q8WXA9 508 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 BAP1Q92560 729 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 GFM2Q969S9 779 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 KIF12Q96FN5 646 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 CEP95Q96GE4 821 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 MBOAT7Q96N66 472 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 PIGSQ96S52 555 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 SMC6Q96SB8 1091 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 TIPINQ9BVW5 301 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 LACRTQ9GZZ8 138 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ISCUQ9H1K1 167 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 EPN3Q9H201 632 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 EPC1Q9H2F5 836 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 KANSL2Q9H9L4 492 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 CD209Q9NNX6 404 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 VCX3AQ9NNX9 186 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 BLOC1S4Q9NUP1 217 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 TYW1Q9NV66 732 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 IL20Q9NYY1 176 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 SEPT10Q9P0V9 454 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ATXN10Q9UBB4 475 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 ZMAT5Q9UDW3 170 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 PCSK1NQ9UHG2 260 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 SERPINB13Q9UIV8 391 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 HDAC9Q9UKV0 1011 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 PHF24Q9UPV7 400 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 UTP11Q9Y3A2 253 aaKnown RBP5.94□□□□□ -1.46
GABPB1-207ENST00000558335 BTAF1O14981 1849 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 TAF1LQ8IZX4 1826 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 LRRC37AA6NMS7 1700 aa5.94□□□□□ -1.46
GABPB1-207ENST00000558335 SNED1Q8TER0 1413 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 IGKV6D-41A0A0C4DH26 115 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 EME2A4GXA9 379 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 FAM187AA6NFU0 413 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RASSF10A6NK89 507 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 TBKBP1A7MCY6 615 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 TMEM110-MUSTN1A8MSY1 372 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 G3V3G9 751 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RNF225M0QZC1 329 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 SNAP23O00161 211 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PODXLO00592 558 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 WNT7AO00755 349 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 LSM1O15116 133 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 WDR46O15213 610 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MEFVO15553 781 aaPredicted RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MGRN1O60291 552 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PHACTR2O75167 634 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 STAM2O75886 525 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RASSF9O75901 435 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 UFL1O94874 794 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 HEXIM1O94992 359 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MOCS3O95396 460 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 NPTXRO95502 500 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 EIF2S1P05198 315 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PLA2G4BP0C869 781 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 FCER1AP12319 257 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 SKIP12755 728 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RPA1P27694 616 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 MAN1A1P33908 653 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PSMC2P35998 433 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 HSPA9P38646 679 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 CLK2P49760 499 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 LIG3P49916 1009 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 PMS1P54277 932 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 HSPA2P54652 639 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 CSE1LP55060 971 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RAB15P59190 212 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 POLR2FP61218 127 aaKnown RBP5.93□□□□□ -1.46
GABPB1-207ENST00000558335 GNGT1P63211 74 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 CYP27A1Q02318 531 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RASSF7Q02833 373 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 C2orf54Q08AI8 447 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 ZBTB17Q13105 803 aa5.93□□□□□ -1.46
GABPB1-207ENST00000558335 RIPK1Q13546 671 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms