RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CATSPER4Q7RTX7 472 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 ZNF410Q86VK4 478 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 C4orf19Q8IY42 314 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 COLGALT1Q8NBJ5 622 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 KIF2CQ99661 725 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 EIF2AK1Q9BQI3 630 aaKnown RBP13.33□□□□□ -0.28
HERC1-202ENST00000558324 TMEM117Q9H0C3 514 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 ZSWIM4Q9H7M6 989 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 AAASQ9NRG9 546 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 RNF19AQ9NV58 838 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 COL4A3BPQ9Y5P4 624 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 MUC3AQ02505 3323 aa13.33□□□□□ -0.28
HERC1-202ENST00000558324 POTEMA6NI47 508 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 LINC01565O15544 149 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 HOXA2O43364 376 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 FGF18O76093 207 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 SRGAP2CP0DJJ0 459 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 RFC5P40937 340 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 CDC42EP1Q00587 391 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 CLLU1OSQ5K130 101 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 TWF2Q6IBS0 349 aaKnown RBP13.32□□□□□ -0.28
HERC1-202ENST00000558324 OTUD6AQ7L8S5 288 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 ADGRD2Q7Z7M1 963 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 LRRC43Q8N309 656 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 FAM184AQ8NB25 1140 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 NEK9Q8TD19 979 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 HELQQ8TDG4 1101 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 MICAL1Q8TDZ2 1067 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 PSPC1Q8WXF1 523 aaKnown RBP13.32□□□□□ -0.28
HERC1-202ENST00000558324 CCDC43Q96MW1 224 aaKnown RBP13.32□□□□□ -0.28
HERC1-202ENST00000558324 CASD1Q96PB1 797 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 LLPHQ9BRT6 129 aaKnown RBP13.32□□□□□ -0.28
HERC1-202ENST00000558324 TMEM60Q9H2L4 133 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 DHX33Q9H6R0 707 aaKnown RBP13.32□□□□□ -0.28
HERC1-202ENST00000558324 CWH43Q9H720 699 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 DACT1Q9NYF0 836 aa13.32□□□□□ -0.28
HERC1-202ENST00000558324 FNDC1Q4ZHG4 1894 aaPredicted RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 TTC28Q96AY4 2481 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 A0A087WWV3 80 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 A0A0U1RQF3 1178 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 TBX10O75333 385 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 SLITRK3O94933 977 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 ATF7P17544 494 aaPredicted RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 LAG3P18627 525 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 DLX2Q07687 328 aaPredicted RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 GNL2Q13823 731 aaKnown RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 LRRC55Q6ZSA7 311 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 RBM23Q86U06 439 aaKnown RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 PRPF31Q8WWY3 499 aaKnown RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 LPPQ93052 612 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 PPP2R3CQ969Q6 453 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 ZSCAN31Q96LW9 406 aaPredicted RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 INO80BQ9C086 356 aaPredicted RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 IFT122Q9HBG6 1241 aa13.31□□□□□ -0.28
HERC1-202ENST00000558324 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
HERC1-202ENST00000558324 PLXNA4Q9HCM2 1894 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 GRXCR2A6NFK2 248 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 LTBRP36941 435 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 PHKA2P46019 1235 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 NRIP1P48552 1158 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 NDUFV1P49821 464 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 HMGN5P82970 282 aaKnown RBP13.3□□□□□ -0.28
HERC1-202ENST00000558324 LAMTOR4Q0VGL1 99 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 ZNF174Q15697 407 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 CTC1Q2NKJ3 1217 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 ZNF598Q86UK7 904 aaKnown RBP13.3□□□□□ -0.28
HERC1-202ENST00000558324 RNF149Q8NC42 400 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 ZNF558Q96NG5 402 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 MTMR9Q96QG7 549 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 MTRQ99707 1265 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 CD320Q9NPF0 282 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 TLR9Q9NR96 1032 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 CHST12Q9NRB3 414 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 INPP5FQ9Y2H2 1132 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
HERC1-202ENST00000558324 ARID2Q68CP9 1835 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 MEIS3P2A8K0S8 358 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 PER2O15055 1255 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 NCK2O43639 380 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 EOMESO95936 686 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 SSTR3P32745 418 aaPredicted RBP13.29□□□□□ -0.28
HERC1-202ENST00000558324 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
HERC1-202ENST00000558324 ERVFC1P60507 584 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 CSPP1Q1MSJ5 1256 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 PLPP4Q5VZY2 271 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 KCNT2Q6UVM3 1135 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 FERMT3Q86UX7 667 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 FAM178BQ8IXR5 827 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 FBXO18Q8NFZ0 1043 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 PIGOQ8TEQ8 1089 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 TCP11Q8WWU5 503 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 HSD17B14Q9BPX1 270 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 TLE6Q9H808 572 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 XPNPEP1Q9NQW7 623 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 AGPAT5Q9NUQ2 364 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 FAM105AQ9NUU6 356 aa13.29□□□□□ -0.28
HERC1-202ENST00000558324 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms