RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 LARSQ9P2J5 1176 aaKnown RBP11.59□□□□□ -0.55
LRRC28-204ENST00000558172 HOOK1Q9UJC3 728 aaKnown RBP11.59□□□□□ -0.55
LRRC28-204ENST00000558172 UMODL1Q5DID0 1318 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 PHLPP2Q6ZVD8 1323 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 A0A087WZ62 844 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 NPHP3-ACAD11A0A0J9YXS1 232 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 KINO60870 393 aaKnown RBP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 TBCAO75347 108 aaKnown RBP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 FAM13AO94988 1023 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 PFKMP08237 780 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 SRGAP2CP0DJJ0 459 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 PLS3P13797 630 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 GAP43P17677 238 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 PTMSP20962 102 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 SCP2P22307 547 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 EIF4BP23588 611 aaKnown RBP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 ABCD1P33897 745 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 PHKA2P46019 1235 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 ZNF131P52739 623 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 SMTNP53814 917 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 MAPK7Q13164 816 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 PPIGQ13427 754 aaKnown RBP eCLIP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 PCBP1Q15365 356 aaKnown RBP eCLIP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 FBXO47Q5MNV8 452 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 DYMQ7RTS9 669 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 SRGAP1Q7Z6B7 1085 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 KSR1Q8IVT5 923 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 CCDC65Q8IXS2 484 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 DAW1Q8N136 415 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 RNF149Q8NC42 400 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 SLC17A8Q8NDX2 589 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 ASAP3Q8TDY4 903 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 SPIRE2Q8WWL2 714 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 DNAJC19Q96DA6 116 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 PAGE5Q96GU1 130 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 NLRP4Q96MN2 994 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 SCLT1Q96NL6 688 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 FDXACB1Q9BRP7 624 aaPredicted RBP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 NTPCRQ9BSD7 190 aaKnown RBP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 TRIM9Q9C026 710 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 C2orf40Q9H1Z8 148 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 SEL1LQ9UBV2 794 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 ZMYND8Q9ULU4 1186 aaPredicted RBP11.58□□□□□ -0.56
LRRC28-204ENST00000558172 GINS2Q9Y248 185 aa11.58□□□□□ -0.56
LRRC28-204ENST00000558172 MICAL3Q7RTP6 2002 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 PVALEFA0A1B0GWK0 134 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 H0YCG3 227 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 GPR182O15218 404 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 GTPBP6O43824 516 aaPredicted RBP11.57□□□□□ -0.56
LRRC28-204ENST00000558172 NR1I2O75469 434 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 RPS6KA5O75582 802 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 CXCL10P02778 98 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 MAPTP10636 758 aaKnown RBP11.57□□□□□ -0.56
LRRC28-204ENST00000558172 DARSP14868 501 aaKnown RBP11.57□□□□□ -0.56
LRRC28-204ENST00000558172 SYN1P17600 705 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 LIG1P18858 919 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 ITGB8P26012 769 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 MCM4P33991 863 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 AFMP43652 599 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 PEX3P56589 373 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 PTENP60484 403 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
LRRC28-204ENST00000558172 FPGSQ05932 587 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 RAD51AP2Q09MP3 1159 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 DMP1Q13316 513 aaPredicted RBP11.57□□□□□ -0.56
LRRC28-204ENST00000558172 CAPSQ13938 189 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 TSHZ1Q6ZSZ6 1077 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 ZBTB8OSQ8IWT0 167 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 MYCT1Q8N699 235 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 STAMQ92783 540 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 BADQ92934 168 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 SCLYQ96I15 445 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 OSMRQ99650 979 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 IFT122Q9HBG6 1241 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 IL23AQ9NPF7 189 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 KMT5AQ9NQR1 393 aa11.57□□□□□ -0.56
LRRC28-204ENST00000558172 FRMD3A2A2Y4 597 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 LRRIQ4A6NIV6 560 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 CCDC169A6NNP5 214 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 SFI1A8K8P3 1242 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 TRAK2O60296 914 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 NBNO60934 754 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 IDEP14735 1019 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 CSF2RAP15509 400 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 SFPQP23246 707 aaKnown RBP eCLIP11.56□□□□□ -0.56
LRRC28-204ENST00000558172 NPTX2P47972 431 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 EFNA5P52803 228 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 ASIC1P78348 528 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 NCBP1Q09161 790 aaKnown RBP11.56□□□□□ -0.56
LRRC28-204ENST00000558172 LPIN1Q14693 890 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 MBTPS1Q14703 1052 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 PLEKHG4Q58EX7 1191 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 CDCA2Q69YH5 1023 aaPredicted RBP11.56□□□□□ -0.56
LRRC28-204ENST00000558172 UNC13DQ70J99 1090 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 DEPTORQ8TB45 409 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 SEPT8Q92599 483 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 APBB2Q92870 758 aa11.56□□□□□ -0.56
LRRC28-204ENST00000558172 KCNN1Q92952 543 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms