RNA–Protein interactions for RNA: ENST00000558056.1

TNFAIP2-202, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-202ENST00000558056 C9IYK1 514 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 MAFO75444 373 aaPredicted RBP18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 RB1P06400 928 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 LINC00271P0C7V0 271 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 YWHABP31946 246 aaKnown RBP18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 TXKP42681 527 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 KCNQ1P51787 676 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 SPIRE1Q08AE8 756 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 TIGD5Q53EQ6 642 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 FAM43BQ6ZT52 329 aaPredicted RBP18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 TPH2Q8IWU9 490 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 ADAMTS19Q8TE59 1207 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 SLC7A3Q8WY07 619 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 NLRP4Q96MN2 994 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 CEP89Q96ST8 783 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 TTC12Q9H892 705 aaPredicted RBP18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 ATP6V0A4Q9HBG4 840 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 CLIC4Q9Y696 253 aa18.42■□□□□ 0.54
TNFAIP2-202ENST00000558056 A0A087WZ62 844 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 IGKV6-21A0A0C4DH24 114 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 C5orf67F2Z3F1 127 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 GRM6O15303 877 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 OR52Z1P0C646 297 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 FGFR1P11362 822 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 DSC3Q14574 896 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 SF3A1Q15459 793 aaKnown RBP18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 FAM102BQ5T8I3 360 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 EP400NLQ6ZTU2 488 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 OTUD6AQ7L8S5 288 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 C4orf19Q8IY42 314 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 ZNF579Q8NAF0 562 aaKnown RBP18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 RNF169Q8NCN4 708 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 USP28Q96RU2 1077 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 EIF2AK1Q9BQI3 630 aaKnown RBP18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 FDXACB1Q9BRP7 624 aaPredicted RBP18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 ZSWIM4Q9H7M6 989 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 ALG13Q9NP73 1137 aaKnown RBP18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 CIZ1Q9ULV3 898 aaPredicted RBP18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 TTC28Q96AY4 2481 aa18.41■□□□□ 0.54
TNFAIP2-202ENST00000558056 LAD1O00515 517 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 ATP2C1P98194 919 aaPredicted RBP18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 CDC42EP1Q00587 391 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 PTPAQ15257 358 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 IL17AQ16552 155 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 FOXD4L6Q3SYB3 417 aaPredicted RBP18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 XKR9Q5GH70 373 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 TCEAL5Q5H9L2 206 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 FOXD4L3Q6VB84 417 aaPredicted RBP18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 KSR1Q8IVT5 923 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 TMEM143Q96AN5 459 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 ZNF396Q96N95 335 aaPredicted RBP18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 PLVAPQ9BX97 442 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 TMEM161AQ9NX61 479 aa18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 TFIP11Q9UBB9 837 aaKnown RBP18.4■□□□□ 0.54
TNFAIP2-202ENST00000558056 ZBTB39O15060 712 aa18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 SFPQP23246 707 aaKnown RBP eCLIP18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 RFC5P40937 340 aa18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 CEBPZQ03701 1054 aaKnown RBP18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 ZNF410Q86VK4 478 aa18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 EXOC8Q8IYI6 725 aa18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 ABI1Q8IZP0 508 aa18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 CCDC43Q96MW1 224 aaKnown RBP18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 UHRF1Q96T88 793 aaPredicted RBP18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 INO80BQ9C086 356 aaPredicted RBP18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 LMAN2LQ9H0V9 348 aa18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 NSUN3Q9H649 340 aaKnown RBP18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 UBE2ZQ9H832 354 aaPredicted RBP18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 COL4A3BPQ9Y5P4 624 aa18.39■□□□□ 0.53
TNFAIP2-202ENST00000558056 PLXNA4Q9HCM2 1894 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 POTEMA6NI47 508 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 SLITRK3O94933 977 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 BMP15O95972 392 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 KCNA5P22460 613 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 PRPHP41219 470 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 TECP42680 631 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 NASPP49321 788 aaPredicted RBP18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 FAM189BP81408 668 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 DNM1Q05193 864 aaKnown RBP18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 EMC2Q15006 297 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 ATL3Q6DD88 541 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 ECHDC2Q86YB7 292 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 KLHL23Q8NBE8 558 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 PSPC1Q8WXF1 523 aaKnown RBP18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 DHX33Q9H6R0 707 aaKnown RBP18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 ELAC1Q9H777 363 aaKnown RBP18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 CHMP5Q9NZZ3 219 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 HCSTQ9UBK5 93 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 PLAGL2Q9UPG8 496 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 PPME1Q9Y570 386 aa18.38■□□□□ 0.53
TNFAIP2-202ENST00000558056 HOXA2O43364 376 aa18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 ITGB1P05556 798 aa18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 SRGAP2CP0DJJ0 459 aa18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 BMP1P13497 986 aa18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 FXR2P51116 673 aaKnown RBP eCLIP18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 SLC39A14Q15043 492 aa18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 ARL6IP4Q66PJ3 421 aaKnown RBP18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 DTHD1Q6ZMT9 781 aa18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 CATSPER4Q7RTX7 472 aa18.37■□□□□ 0.53
TNFAIP2-202ENST00000558056 NEK9Q8TD19 979 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms