RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 GJA10Q969M2 543 aa14.35□□□□□ -0.11
CPNE6-204ENST00000557829 NOC2LQ9Y3T9 749 aaKnown RBP14.35□□□□□ -0.11
CPNE6-204ENST00000557829 GAP43P17677 238 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 HNRNPH1P31943 449 aaKnown RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 HOXD13P35453 343 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 RNASE9P60153 205 aaKnown RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 SLFN13Q68D06 897 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 RBM46Q8TBY0 533 aaKnown RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 HES6Q96HZ4 224 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 GLIS2Q9BZE0 524 aaPredicted RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 KRIT1O00522 736 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 NR3C1P04150 777 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 PAEPP09466 180 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 STAT1P42224 750 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 CASP5P51878 434 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 ENOX2Q16206 610 aaKnown RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 UAP1Q16222 522 aaPredicted RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 QRICH1Q2TAL8 776 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 KIAA1755Q5JYT7 1200 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 C6orf89Q6UWU4 347 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 NT5DC3Q86UY8 548 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 TEX2Q8IWB9 1127 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 POLR3CQ9BUI4 534 aaPredicted RBP14.34□□□□□ -0.11
CPNE6-204ENST00000557829 RABEP2Q9H5N1 569 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 PCDHA1Q9Y5I3 950 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 WDR90Q96KV7 1748 aa14.34□□□□□ -0.11
CPNE6-204ENST00000557829 NCANO14594 1321 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 POTEFA5A3E0 1075 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L15C9J2P7 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L13C9JLJ4 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L11C9JVI0 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L18D6R9N7 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L22D6RA61 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L17D6RBQ6 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L19D6RCP7 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L20D6RJB6 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 F5H6K3 240 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 AKAP3O75969 853 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 NDUFB10O96000 172 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 POTEIP0CG38 1075 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 SPATA31C1P0DKV0 1188 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 CTNNA1P35221 906 aaKnown RBP14.33□□□□□ -0.11
CPNE6-204ENST00000557829 ARHGAP4P98171 946 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 KLRC3Q07444 240 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 ZNF844Q08AG5 666 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L24Q0WX57 530 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 USP17L6PQ6QN14 398 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 POTEGQ6S5H5 508 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 POTEEQ6S8J3 1075 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 ARMC9Q7Z3E5 817 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 SLC30A5Q8TAD4 765 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 SLC35C1Q96A29 364 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 REEP2Q9BRK0 252 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 ZHX3Q9H4I2 956 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 RRAGCQ9HB90 399 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 OLFML3Q9NRN5 406 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 SLC12A6Q9UHW9 1150 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 AMFRQ9UKV5 643 aa14.33□□□□□ -0.11
CPNE6-204ENST00000557829 SSC5DA1L4H1 1573 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 GMNCA6NCL1 334 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 ADM5C9JUS6 153 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 MEIS2O14770 477 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 KIF3CO14782 793 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 EIF3DO15371 548 aaKnown RBP eCLIP14.33□□□□□ -0.12
CPNE6-204ENST00000557829 CIITAP33076 1130 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 EIF3BP55884 814 aaKnown RBP14.33□□□□□ -0.12
CPNE6-204ENST00000557829 SPICE1Q8N0Z3 855 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 GMCL1P1Q8NEA9 526 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 BORCS6Q96GS4 357 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 MKNK1Q9BUB5 465 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 CAPN7Q9Y6W3 813 aa14.33□□□□□ -0.12
CPNE6-204ENST00000557829 ASTN1O14525 1302 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 TMCO5BA8MYB1 307 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 DDX3XO00571 662 aaKnown RBP eCLIP14.32□□□□□ -0.12
CPNE6-204ENST00000557829 EYA4O95677 639 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 CCDC172P0C7W6 258 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 POTEJP0CG39 1038 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 CHRM1P11229 460 aaPredicted RBP14.32□□□□□ -0.12
CPNE6-204ENST00000557829 EPHX2P34913 555 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 STAT3P40763 770 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 NAP1L3Q99457 506 aaPredicted RBP14.32□□□□□ -0.12
CPNE6-204ENST00000557829 ACTR5Q9H9F9 607 aaPredicted RBP14.32□□□□□ -0.12
CPNE6-204ENST00000557829 UBE4BO95155 1302 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 ASNSP08243 561 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 TMEM253P0C7T8 217 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 PPP2R2AP63151 447 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 POU5F1Q01860 360 aaKnown RBP14.32□□□□□ -0.12
CPNE6-204ENST00000557829 CABS1Q96KC9 395 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 STK33Q9BYT3 514 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 DDX47Q9H0S4 455 aaKnown RBP14.32□□□□□ -0.12
CPNE6-204ENST00000557829 RAB17Q9H0T7 212 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 ARHGEF10LQ9HCE6 1279 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 UTP11Q9Y3A2 253 aaKnown RBP14.32□□□□□ -0.12
CPNE6-204ENST00000557829 PPP2R3BQ9Y5P8 575 aa14.32□□□□□ -0.12
CPNE6-204ENST00000557829 SMCHD1A6NHR9 2005 aa14.31□□□□□ -0.12
CPNE6-204ENST00000557829 C5orf60A6NFR6 353 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms