RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 ORC2Q13416 577 aaPredicted RBP24.29■■□□□ 1.48
CRNDE-203ENST00000557792 DSC3Q14574 896 aa24.29■■□□□ 1.48
CRNDE-203ENST00000557792 C4orf32Q8N8J7 132 aa24.29■■□□□ 1.48
CRNDE-203ENST00000557792 NLRP7Q8WX94 980 aa24.29■■□□□ 1.48
CRNDE-203ENST00000557792 SLC7A3Q8WY07 619 aa24.29■■□□□ 1.48
CRNDE-203ENST00000557792 SCLT1Q96NL6 688 aa24.29■■□□□ 1.48
CRNDE-203ENST00000557792 JPH2Q9BR39 696 aaPredicted RBP24.29■■□□□ 1.48
CRNDE-203ENST00000557792 NOL7Q9UMY1 257 aaKnown RBP24.29■■□□□ 1.48
CRNDE-203ENST00000557792 PPME1Q9Y570 386 aa24.29■■□□□ 1.48
CRNDE-203ENST00000557792 C9IYK1 514 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 OR52Z1P0C646 297 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 STAG3L1P0CL83 205 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 TECP42680 631 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 SARSP49591 514 aaKnown RBP24.28■■□□□ 1.48
CRNDE-203ENST00000557792 XKR9Q5GH70 373 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 SLC24A5Q71RS6 500 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 RHPN2Q8IUC4 686 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 KSR1Q8IVT5 923 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 SMC3Q9UQE7 1217 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 HCN4Q9Y3Q4 1203 aa24.28■■□□□ 1.48
CRNDE-203ENST00000557792 A0A087WWV3 80 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 A0A087WZ62 844 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 NCK2O43639 380 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 SPATA31C1P0DKV0 1188 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 IBSPP21815 317 aaPredicted RBP24.27■■□□□ 1.48
CRNDE-203ENST00000557792 FGFR4P22455 802 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 LTBRP36941 435 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 RFC5P40937 340 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 POLGP54098 1239 aaPredicted RBP24.27■■□□□ 1.48
CRNDE-203ENST00000557792 FAM189BP81408 668 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 HYAL1Q12794 435 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 EXOC8Q8IYI6 725 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 TMEM143Q96AN5 459 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 FDXACB1Q9BRP7 624 aaPredicted RBP24.27■■□□□ 1.48
CRNDE-203ENST00000557792 PLVAPQ9BX97 442 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 GCOM2Q9BZD3 368 aaPredicted RBP24.27■■□□□ 1.48
CRNDE-203ENST00000557792 C1orf112Q9NSG2 853 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 PCDHB7Q9Y5E2 793 aa24.27■■□□□ 1.48
CRNDE-203ENST00000557792 MRPL42Q9Y6G3 142 aaKnown RBP24.27■■□□□ 1.48
CRNDE-203ENST00000557792 CTC1Q2NKJ3 1217 aa24.26■■□□□ 1.47
CRNDE-203ENST00000557792 MCTP1Q6DN14 999 aa24.26■■□□□ 1.47
CRNDE-203ENST00000557792 CMTR2Q8IYT2 770 aaKnown RBP24.26■■□□□ 1.47
CRNDE-203ENST00000557792 PRPF31Q8WWY3 499 aaKnown RBP24.26■■□□□ 1.47
CRNDE-203ENST00000557792 ALG13Q9NP73 1137 aaKnown RBP24.26■■□□□ 1.47
CRNDE-203ENST00000557792 BMP2KQ9NSY1 1161 aaPredicted RBP24.26■■□□□ 1.47
CRNDE-203ENST00000557792 ANKEF1Q9NU02 776 aa24.26■■□□□ 1.47
CRNDE-203ENST00000557792 LRFN2Q9ULH4 789 aa24.26■■□□□ 1.47
CRNDE-203ENST00000557792 FAM50BQ9Y247 325 aa24.26■■□□□ 1.47
CRNDE-203ENST00000557792 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.26■■□□□ 1.47
CRNDE-203ENST00000557792 PCDHB6Q9Y5E3 794 aa24.26■■□□□ 1.47
CRNDE-203ENST00000557792 CSPG5O95196 566 aa24.25■■□□□ 1.47
CRNDE-203ENST00000557792 GATMP50440 423 aa24.25■■□□□ 1.47
CRNDE-203ENST00000557792 ZNF410Q86VK4 478 aa24.25■■□□□ 1.47
CRNDE-203ENST00000557792 CATSPER3Q86XQ3 398 aa24.25■■□□□ 1.47
CRNDE-203ENST00000557792 PIGOQ8TEQ8 1089 aa24.25■■□□□ 1.47
CRNDE-203ENST00000557792 PLAGL2Q9UPG8 496 aa24.25■■□□□ 1.47
CRNDE-203ENST00000557792 ARIH1Q9Y4X5 557 aaPredicted RBP24.25■■□□□ 1.47
CRNDE-203ENST00000557792 H3BQV1 296 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 MED24O75448 989 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 ZSCAN20P17040 1043 aaPredicted RBP24.24■■□□□ 1.47
CRNDE-203ENST00000557792 ZP2Q05996 745 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 DLX2Q07687 328 aaPredicted RBP24.24■■□□□ 1.47
CRNDE-203ENST00000557792 CUL4AQ13619 759 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 CAMK1Q14012 370 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 EMC2Q15006 297 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 P2RX5Q93086 422 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 NLRP4Q96MN2 994 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 COL4A3BPQ9Y5P4 624 aa24.24■■□□□ 1.47
CRNDE-203ENST00000557792 XRCC6P12956 609 aaKnown RBP eCLIP24.23■■□□□ 1.47
CRNDE-203ENST00000557792 GTF2F1P35269 517 aaKnown RBP eCLIP24.23■■□□□ 1.47
CRNDE-203ENST00000557792 RARRES1P49788 294 aa24.23■■□□□ 1.47
CRNDE-203ENST00000557792 PTGDRQ13258 359 aa24.23■■□□□ 1.47
CRNDE-203ENST00000557792 PAN2Q504Q3 1202 aaKnown RBP24.23■■□□□ 1.47
CRNDE-203ENST00000557792 FAM102BQ5T8I3 360 aa24.23■■□□□ 1.47
CRNDE-203ENST00000557792 LARP1BQ659C4 914 aaKnown RBP24.23■■□□□ 1.47
CRNDE-203ENST00000557792 PSPC1Q8WXF1 523 aaKnown RBP24.23■■□□□ 1.47
CRNDE-203ENST00000557792 POLR3CQ9BUI4 534 aaPredicted RBP24.23■■□□□ 1.47
CRNDE-203ENST00000557792 IFT122Q9HBG6 1241 aa24.23■■□□□ 1.47
CRNDE-203ENST00000557792 TUFT1Q9NNX1 390 aa24.23■■□□□ 1.47
CRNDE-203ENST00000557792 XPNPEP1Q9NQW7 623 aa24.23■■□□□ 1.47
CRNDE-203ENST00000557792 PRKAG3Q9UGI9 489 aa24.23■■□□□ 1.47
CRNDE-203ENST00000557792 GAS2O43903 313 aaKnown RBP24.22■■□□□ 1.47
CRNDE-203ENST00000557792 ITGB1P05556 798 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 SRGAP2CP0DJJ0 459 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 ALADP13716 330 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 LAMTOR4Q0VGL1 99 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 CLUL1Q15846 466 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 NAALADL2Q58DX5 795 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 TCP11Q8WWU5 503 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 INO80BQ9C086 356 aaPredicted RBP24.22■■□□□ 1.47
CRNDE-203ENST00000557792 IGFLR1Q9H665 355 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 ELAC1Q9H777 363 aaKnown RBP24.22■■□□□ 1.47
CRNDE-203ENST00000557792 RNF216Q9NWF9 866 aaPredicted RBP24.22■■□□□ 1.47
CRNDE-203ENST00000557792 TMEM161AQ9NX61 479 aa24.22■■□□□ 1.47
CRNDE-203ENST00000557792 C19orf67A6NJJ6 358 aa24.21■■□□□ 1.47
CRNDE-203ENST00000557792 PRR33A8MZF0 331 aa24.21■■□□□ 1.47
CRNDE-203ENST00000557792 DNAJB1P25685 340 aa24.21■■□□□ 1.47
CRNDE-203ENST00000557792 RPA1P27694 616 aa24.21■■□□□ 1.47
CRNDE-203ENST00000557792 FXR2P51116 673 aaKnown RBP eCLIP24.21■■□□□ 1.47
CRNDE-203ENST00000557792 FERMT3Q86UX7 667 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms