RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 PSEN2P49810 448 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 MFSD10Q14728 455 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 GRIK4Q16099 956 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 SLC9C1Q4G0N8 1177 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 ZCWPW2Q504Y3 356 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 TTI2Q6NXR4 508 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 HAUS6Q7Z4H7 955 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 SRGAP1Q7Z6B7 1085 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 FMNL3Q8IVF7 1028 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 DHX40Q8IX18 779 aaKnown RBP11.56□□□□□ -0.56
GABRB3-213ENST00000557765 DOCK3Q8IZD9 2030 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 DAW1Q8N136 415 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 CSGALNACT2Q8N6G5 542 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 LINC01465Q8N7H1 131 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 C7orf31Q8N865 590 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 DEPTORQ8TB45 409 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 SCFD1Q8WVM8 642 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 NELFBQ8WX92 580 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 RSPH1Q8WYR4 309 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 MRFAP1L1Q96HT8 127 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 GLT1D1Q96MS3 346 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 TSPAN18Q96SJ8 248 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 PAK6Q9NQU5 681 aaPredicted RBP11.56□□□□□ -0.56
GABRB3-213ENST00000557765 NFE2L3Q9Y4A8 694 aa11.56□□□□□ -0.56
GABRB3-213ENST00000557765 ZBTB42B2RXF5 422 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 K7ENM7 598 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 STX10O60499 249 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 ZNF18P17022 549 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 CDK11BP21127 795 aaKnown RBP11.55□□□□□ -0.56
GABRB3-213ENST00000557765 CDC25BP30305 580 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 AXLP30530 894 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 NPEPPSP55786 919 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 ADAM17P78536 824 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 KIAA0753Q2KHM9 967 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 CDKAL1Q5VV42 579 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 CCSAPQ6IQ19 270 aaPredicted RBP11.55□□□□□ -0.56
GABRB3-213ENST00000557765 MTHFD1LQ6UB35 978 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 C11orf57Q6ZUT1 292 aaPredicted RBP11.55□□□□□ -0.56
GABRB3-213ENST00000557765 FRMD5Q7Z6J6 570 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 TMEM161BQ8NDZ6 487 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 COPS5Q92905 334 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 FIZ1Q96SL8 496 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
GABRB3-213ENST00000557765 KCTD10Q9H3F6 313 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 ZHX3Q9H4I2 956 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 SLC39A2Q9NP94 309 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 XPNPEP1Q9NQW7 623 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 PRMT7Q9NVM4 692 aaPredicted RBP11.55□□□□□ -0.56
GABRB3-213ENST00000557765 TBX20Q9UMR3 447 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 FRMD4BQ9Y2L6 1034 aa11.55□□□□□ -0.56
GABRB3-213ENST00000557765 C17orf102A2RUQ5 167 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 KBTBD13C9JR72 458 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 K7ERI5 159 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 M0QZ92 97 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 KLRC1P26715 233 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 NCAPHQ15003 741 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 MAPK6Q16659 721 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 C1orf53Q5VUE5 145 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 PLA2G4FQ68DD2 849 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 EFCAB12Q6NXP0 572 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 GAS2L3Q86XJ1 694 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 SYCP3Q8IZU3 236 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 CCDC155Q8N6L0 562 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 AOPEPQ8N6M6 819 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 TRPV1Q8NER1 839 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 ARMC5Q96C12 935 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 CCDC51Q96ER9 411 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 RBSNQ9H1K0 784 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 RNPEPQ9H4A4 650 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 BCAS3Q9H6U6 928 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 PRDM10Q9NQV6 1147 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 RNF216Q9NWF9 866 aaPredicted RBP11.54□□□□□ -0.56
GABRB3-213ENST00000557765 LIMA1Q9UHB6 759 aaKnown RBP11.54□□□□□ -0.56
GABRB3-213ENST00000557765 GTF2IRD1Q9UHL9 959 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 GDAQ9Y2T3 454 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 STYXL1Q9Y6J8 313 aa11.54□□□□□ -0.56
GABRB3-213ENST00000557765 CCDC169A6NNP5 214 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 ACKR2O00590 384 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 ZBTB39O15060 712 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 PMM2O15305 246 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 P4HA2O15460 535 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 SMIM10L2AP0DMW4 78 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 SMIM10L2BP0DMW5 78 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 EPB41P11171 864 aaKnown RBP11.53□□□□□ -0.56
GABRB3-213ENST00000557765 PSMC2P35998 433 aaKnown RBP11.53□□□□□ -0.56
GABRB3-213ENST00000557765 AP3M2P53677 418 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 PEX3P56589 373 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 PTENP60484 403 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 CCDC173Q0VFZ6 552 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 LAMTOR4Q0VGL1 99 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 TRIM14Q14142 442 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 SURF1Q15526 300 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 PRAMEF19Q5SWL8 479 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 INTS8Q75QN2 995 aaKnown RBP11.53□□□□□ -0.56
GABRB3-213ENST00000557765 LUZP1Q86V48 1076 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 KAT2BQ92831 832 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 UIMC1Q96RL1 719 aa11.53□□□□□ -0.56
GABRB3-213ENST00000557765 MRPL4Q9BYD3 311 aaKnown RBP11.53□□□□□ -0.56
GABRB3-213ENST00000557765 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms