RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	CD72	P21854	359 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	RPS9	P46781	194 aa	Known RBP	10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	NT5C2	P49902	561 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	STAT5B	P51692	787 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	LIMK1	P53667	647 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	PFKP	Q01813	784 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	KIZ	Q2M2Z5	673 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	GET4	Q7L5D6	327 aa	Predicted RBP	10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	PLPPR4	Q7Z2D5	763 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	HOMER1	Q86YM7	354 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	PHKB	Q93100	1093 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	PPP1R16B	Q96T49	567 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	RPP25	Q9BUL9	199 aa	Known RBP	10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	PKD2L1	Q9P0L9	805 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	IGF2R	P11717	2491 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	RALGAPA1	Q6GYQ0	2036 aa		10.77	□□□□□ -0.69
PABPN1-208	ENST00000557702	TM4SF5	O14894	197 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	SSB	P05455	408 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	MTAP	Q13126	283 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	SIM2	Q14190	667 aa	Predicted RBP	10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	AASDH	Q4L235	1098 aa	Predicted RBP	10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	TBC1D10C	Q8IV04	446 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	SMARCC2	Q8TAQ2	1214 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	RSPH1	Q8WYR4	309 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	MAP4K1	Q92918	833 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	JPH1	Q9HDC5	661 aa	Predicted RBP	10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	MRPL17	Q9NRX2	175 aa	Known RBP	10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	DDX19B	Q9UMR2	479 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	PATJ	Q8NI35	1801 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702	TTC41P	Q6P2S7	1318 aa		10.76	□□□□□ -0.69
PABPN1-208	ENST00000557702		A0A0U1RQF3	1178 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	TAF4	O00268	1085 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	MAFG	O15525	162 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	HBP1	O60381	514 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	RFPL2	O75678	378 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	KCNK5	O95279	499 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	ZIC2	O95409	532 aa	Predicted RBP	10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	GALT	P07902	379 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	MS4A1	P11836	297 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	TARS	P26639	723 aa	Known RBP	10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	SLC26A2	P50443	739 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	MTMR1	Q13613	665 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	PARM1	Q6UWI2	310 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	ENAH	Q8N8S7	591 aa	Predicted RBP	10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	CUL5	Q93034	780 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	PIGS	Q96S52	555 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	CHMP4B	Q9H444	224 aa	Known RBP	10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	HELLS	Q9NRZ9	838 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	SLC9A2	Q9UBY0	812 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	MRPS17	Q9Y2R5	130 aa	Known RBP	10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	ZMYM6	O95789	1325 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	NEDD4	P46934	1319 aa		10.75	□□□□□ -0.69
PABPN1-208	ENST00000557702	SDK1	Q7Z5N4	2213 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	PNMA6F	A0A0J9YX94	578 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	LILRB3	O75022	631 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	GPR32	O75388	356 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	GLUD1	P00367	558 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	VTN	P04004	478 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	ADH1A	P07327	375 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	MYB	P10242	640 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	TDGF1	P13385	188 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	ITGB5	P18084	799 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	ADCY1	Q08828	1119 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	ZNF852	Q6ZMS4	543 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	MTSS1L	Q765P7	747 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	ZNF598	Q86UK7	904 aa	Known RBP	10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	C12orf50	Q8NA57	414 aa	Predicted RBP	10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	FGF14	Q92915	247 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	ZNF707	Q96C28	371 aa	Predicted RBP	10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	KIF12	Q96FN5	646 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	LSM14B	Q9BX40	385 aa	Known RBP	10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	VN1R3	Q9BXE9	311 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	NT5C3A	Q9H0P0	336 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	NRDE2	Q9H7Z3	1164 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	MAD2L2	Q9UI95	211 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	SSX2IP	Q9Y2D8	614 aa		10.74	□□□□□ -0.69
PABPN1-208	ENST00000557702	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	C2CD2L	O14523	706 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	AK2	P54819	239 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	ACTR2	P61160	394 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	RNASEL	Q05823	741 aa	Known RBP	10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	FZD5	Q13467	585 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	MCMDC2	Q4G0Z9	681 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	IFIT1B	Q5T764	474 aa	Known RBP	10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	DIEXF	Q68CQ4	756 aa	Known RBP	10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	PSAPL1	Q6NUJ1	521 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	USP17L6P	Q6QN14	398 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	MAMSTR	Q6ZN01	415 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	TPRG1	Q6ZUI0	275 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	METTL13	Q8N6R0	699 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	PI4K2B	Q8TCG2	481 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	HDAC7	Q8WUI4	952 aa		10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.73	□□□□□ -0.69
PABPN1-208	ENST00000557702	ADAM33	Q9BZ11	813 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms