RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ASIC1P78348 528 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 MDM2Q00987 491 aaPredicted RBP16.91■□□□□ 0.3
NEDD1-213ENST00000557644 MXD4Q14582 209 aaPredicted RBP16.91■□□□□ 0.3
NEDD1-213ENST00000557644 CCDC155Q8N6L0 562 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 SCLT1Q96NL6 688 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 TIPINQ9BVW5 301 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 IFT122Q9HBG6 1241 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 ODF2LQ9ULJ1 636 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 RANBP2P49792 3224 aaKnown RBP16.91■□□□□ 0.3
NEDD1-213ENST00000557644 FAM13AO94988 1023 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 TIMP1P01033 207 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 RGS19P49795 217 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 PNOCQ13519 176 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 GPNMBQ14956 572 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 TIGD1Q96MW7 591 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 PRKAG2Q9UGJ0 569 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 TRPV2Q9Y5S1 764 aa16.91■□□□□ 0.3
NEDD1-213ENST00000557644 ADGRA3Q8IWK6 1321 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 CEP290O15078 2479 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 LRRIQ4A6NIV6 560 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 M0QZ92 97 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 CAND2O75155 1236 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 TBCAO75347 108 aaKnown RBP16.9■□□□□ 0.3
NEDD1-213ENST00000557644 NPTX2P47972 431 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 ZNF131P52739 623 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 MYCT1Q8N699 235 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 LRRC27Q9C0I9 530 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 PARVGQ9HBI0 331 aa16.9■□□□□ 0.3
NEDD1-213ENST00000557644 PLS3P13797 630 aa16.89■□□□□ 0.3
NEDD1-213ENST00000557644 POSTNQ15063 836 aa16.89■□□□□ 0.3
NEDD1-213ENST00000557644 CAMK4Q16566 473 aa16.89■□□□□ 0.3
NEDD1-213ENST00000557644 ODR4Q5SWX8 454 aa16.89■□□□□ 0.3
NEDD1-213ENST00000557644 HPS3Q969F9 1004 aa16.89■□□□□ 0.3
NEDD1-213ENST00000557644 MINDY3Q9H8M7 445 aa16.89■□□□□ 0.3
NEDD1-213ENST00000557644 PANK4Q9NVE7 773 aa16.89■□□□□ 0.3
NEDD1-213ENST00000557644 LAMA2P24043 3122 aaKnown RBP16.89■□□□□ 0.29
NEDD1-213ENST00000557644 CCDC169A6NNP5 214 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 ASAP2O43150 1006 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 GTPBP6O43824 516 aaPredicted RBP16.89■□□□□ 0.29
NEDD1-213ENST00000557644 NBNO60934 754 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 RPLP2P05387 115 aaKnown RBP16.89■□□□□ 0.29
NEDD1-213ENST00000557644 GHRP10912 638 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 CRYBB1P53674 252 aaPredicted RBP16.89■□□□□ 0.29
NEDD1-213ENST00000557644 DPYDQ12882 1025 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 DMP1Q13316 513 aaPredicted RBP16.89■□□□□ 0.29
NEDD1-213ENST00000557644 KANK3Q6NY19 840 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 CNNM4Q6P4Q7 775 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 SFR1Q86XK3 245 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 IFT74Q96LB3 600 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 TBC1D7Q9P0N9 293 aa16.89■□□□□ 0.29
NEDD1-213ENST00000557644 FRMD3A2A2Y4 597 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 FGFR4P22455 802 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 NAMPTP43490 491 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 ZNF410Q86VK4 478 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 BADQ92934 168 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 AGO3Q9H9G7 860 aaKnown RBP16.88■□□□□ 0.29
NEDD1-213ENST00000557644 LARSQ9P2J5 1176 aaKnown RBP16.88■□□□□ 0.29
NEDD1-213ENST00000557644 SLC16A4O15374 487 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 KLRC4O43908 158 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 CSF2RAP15509 400 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 PTENP60484 403 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 COASYQ13057 564 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 TFDP1Q14186 410 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 LPIN1Q14693 890 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 HERC4Q5GLZ8 1057 aaPredicted RBP16.88■□□□□ 0.29
NEDD1-213ENST00000557644 FBXO47Q5MNV8 452 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 VWCEQ96DN2 955 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 FIZ1Q96SL8 496 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 C17orf75Q9HAS0 396 aa16.88■□□□□ 0.29
NEDD1-213ENST00000557644 NOC2LQ9Y3T9 749 aaKnown RBP16.88■□□□□ 0.29
NEDD1-213ENST00000557644 SIP14410 1827 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 DARSP14868 501 aaKnown RBP16.87■□□□□ 0.29
NEDD1-213ENST00000557644 EIF4BP23588 611 aaKnown RBP16.87■□□□□ 0.29
NEDD1-213ENST00000557644 PPP2R5AQ15172 486 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 MFSD5Q6N075 450 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 DEFB128Q7Z7B8 93 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 DEPTORQ8TB45 409 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 FGFBP2Q9BYJ0 223 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 GCOM2Q9BZD3 368 aaPredicted RBP16.87■□□□□ 0.29
NEDD1-213ENST00000557644 KMT5AQ9NQR1 393 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 TRAK2O60296 914 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 NMT1P30419 496 aaKnown RBP16.87■□□□□ 0.29
NEDD1-213ENST00000557644 CDC42EP1Q00587 391 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 UNC13DQ70J99 1090 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 CCDC65Q8IXS2 484 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 CCDC34Q96HJ3 373 aa16.87■□□□□ 0.29
NEDD1-213ENST00000557644 RPN1P04843 607 aaKnown RBP16.86■□□□□ 0.29
NEDD1-213ENST00000557644 MYL1P05976 194 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 PHKA2P46019 1235 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 KMT5BQ4FZB7 885 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 CDCA2Q69YH5 1023 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-213ENST00000557644 FAM178BQ8IXR5 827 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 GLIS3Q8NEA6 775 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 NTPCRQ9BSD7 190 aaKnown RBP16.86■□□□□ 0.29
NEDD1-213ENST00000557644 USP20Q9Y2K6 914 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 PCDHA5Q9Y5H7 936 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 NR2E3Q9Y5X4 410 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 SCN5AQ14524 2016 aa16.86■□□□□ 0.29
NEDD1-213ENST00000557644 INO80B-WBP1J3KQ70 363 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms