RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 POU2F2P09086 479 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PHKG2P15735 406 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 RAB27AP51159 221 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PURAQ00577 322 aaKnown RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PCBP2Q15366 365 aaKnown RBP eCLIP2.29□□□□□ -2.041e-6■■■□□ 17.3
HIF1A-212ENST00000557538 GFOD2Q3B7J2 385 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 MINDY4Q4G0A6 757 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 KLHDC10Q6PID8 442 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 LRSAM1Q6UWE0 723 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 SRGAP1Q7Z6B7 1085 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 ZNF605Q86T29 641 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 KRTAP19-1Q8IUB9 90 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FMNL3Q8IVF7 1028 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 RBM12BQ8IXT5 1001 aaKnown RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 TP53I13Q8NBR0 393 aaPredicted RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 NSUN6Q8TEA1 469 aaKnown RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FNIP1Q8TF40 1166 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 FERMT2Q96AC1 680 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 HSPBAP1Q96EW2 488 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 CYFIP2Q96F07 1278 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 NOX5Q96PH1 765 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PDCD2LQ9BRP1 358 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 CCDC8Q9H0W5 538 aaPredicted RBP2.29□□□□□ -2.04
HIF1A-212ENST00000557538 PRDM12Q9H4Q4 367 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 MRFAP1Q9Y605 127 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 SLC4A7Q9Y6M7 1214 aa2.29□□□□□ -2.04
HIF1A-212ENST00000557538 ANO9A1A5B4 782 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 GOLGA6CA6NDK9 693 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 GOLGA6BA6NDN3 693 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 GOLGA6DP0CG33 693 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 C5AR1P21730 350 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 SPIDRQ14159 915 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 TRIM25Q14258 630 aaKnown RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 METTL24Q5JXM2 366 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 ZFYVE27Q5T4F4 411 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 FAM180AQ6UWF9 173 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 CD300LDQ6UXZ3 194 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 SIAH1Q8IUQ4 282 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 LINC01356Q8N9X3 169 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 RABGGTAQ92696 567 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 HPS3Q969F9 1004 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 EAF2Q96CJ1 260 aaPredicted RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 CSRNP2Q9H175 543 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 SLC39A2Q9NP94 309 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 C1orf112Q9NSG2 853 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 GOLGA6AQ9NYA3 693 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 CNOT11Q9UKZ1 510 aaKnown RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 PLA2G2DQ9UNK4 145 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 ETV2O00321 342 aaPredicted RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 TMEM127O75204 238 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 H2AFYO75367 372 aaKnown RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 KRT37O76014 449 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 CELA3BP08861 270 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 HSPA6P17066 643 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 IARSP41252 1262 aaKnown RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 AGFG1P52594 562 aaKnown RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 EPHB3P54753 998 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 HGFACQ04756 655 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 NOLC1Q14978 699 aaKnown RBP eCLIP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 GRAMD4Q6IC98 578 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 HDGFL2Q7Z4V5 671 aaPredicted RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 DGKHQ86XP1 1220 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 RAVER1Q8IY67 606 aaKnown RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 KIAA0319LQ8IZA0 1049 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 TTC8Q8TAM2 541 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 CASKIN2Q8WXE0 1202 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 JPH3Q8WXH2 748 aaPredicted RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 FAM167AQ96KS9 214 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 FAM193BQ96PV7 902 aaPredicted RBP2.28□□□□□ -2.04
HIF1A-212ENST00000557538 TMEM60Q9H2L4 133 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 KCTD10Q9H3F6 313 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 RAPGEFL1Q9UHV5 662 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 TUBD1Q9UJT1 453 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 KCTD3Q9Y597 815 aa2.28□□□□□ -2.04
HIF1A-212ENST00000557538 ST20-MTHFSA0A0A6YYL1 179 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 LRRC10BA6NIK2 292 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 KCNK3O14649 394 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 CAND2O75155 1236 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 TUSC2O75896 110 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 TMEM253P0C7T8 217 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 ZSCAN20P17040 1043 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 RPL17P18621 184 aaKnown RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 EDNRBP24530 442 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 CRHR1P34998 444 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 STAT5AP42229 794 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 GALK1P51570 392 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 CD83Q01151 205 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MUM1L1Q5H9M0 696 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 EFCAB2Q5VUJ9 269 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MPZL3Q6UWV2 235 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 IFNL2Q8IZJ0 200 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 CARFQ8N187 725 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 THEMISQ8N1K5 641 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 GPR156Q8NFN8 814 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 SNX33Q8WV41 574 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 MTMR8Q96EF0 704 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 FDXACB1Q9BRP7 624 aaPredicted RBP2.27□□□□□ -2.05
HIF1A-212ENST00000557538 DNAJC28Q9NX36 388 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 ZFP69BQ9UJL9 534 aa2.27□□□□□ -2.05
HIF1A-212ENST00000557538 H3BML4 177 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms