RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 MAN1C1Q9NR34 630 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 SPATA6Q9NWH7 488 aaPredicted RBP11.84□□□□□ -0.51
TRAV33-201ENST00000557514 IGF2RP11717 2491 aa11.84□□□□□ -0.51
TRAV33-201ENST00000557514 CNOT1A5YKK6 2376 aaKnown RBP11.84□□□□□ -0.51
TRAV33-201ENST00000557514 TBC1D4O60343 1298 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 LILRB3O75022 631 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 CCNE2O96020 404 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 GALTP07902 379 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.52
TRAV33-201ENST00000557514 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 SHDQ96IW2 340 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 DSCC1Q9BVC3 393 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 SPZ1Q9BXG8 430 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 ADAMTS10Q9H324 1103 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 SENP2Q9HC62 589 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 GMEB2Q9UKD1 530 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 ANGPTL2Q9UKU9 493 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 NUMBLQ9Y6R0 609 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 MYH6P13533 1939 aa11.83□□□□□ -0.52
TRAV33-201ENST00000557514 KAT6AQ92794 2004 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 KANSL1LA0AUZ9 987 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 LAMP2P13473 410 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 EIF4BP23588 611 aaKnown RBP11.82□□□□□ -0.52
TRAV33-201ENST00000557514 KLRC2P26717 231 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 PMLP29590 882 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 MAGEA9P43362 315 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 SHC2P98077 582 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 CSTF1Q05048 431 aaKnown RBP11.82□□□□□ -0.52
TRAV33-201ENST00000557514 LINC01465Q8N7H1 131 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 ZNF707Q96C28 371 aaPredicted RBP11.82□□□□□ -0.52
TRAV33-201ENST00000557514 OSBPL6Q9BZF3 934 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 NRDE2Q9H7Z3 1164 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 PSTPIP2Q9H939 334 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 PRMT8Q9NR22 394 aaPredicted RBP11.82□□□□□ -0.52
TRAV33-201ENST00000557514 TBC1D13Q9NVG8 400 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 STK39Q9UEW8 545 aa11.82□□□□□ -0.52
TRAV33-201ENST00000557514 CCDC195A0A1B0GUA6 201 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 SPDYE3A6NKU9 549 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 BACH1O14867 736 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 INPPL1O15357 1258 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 B4GALT3O60512 393 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 SDSP20132 328 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 SLC11A1P49279 550 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 CLCN3P51790 818 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 COL9A3Q14050 684 aaPredicted RBP11.81□□□□□ -0.52
TRAV33-201ENST00000557514 UBE2SQ16763 222 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 FAM160B1Q5W0V3 765 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 ABHD15Q6UXT9 468 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 METTL13Q8N6R0 699 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 RRP36Q96EU6 259 aaKnown RBP11.81□□□□□ -0.52
TRAV33-201ENST00000557514 MXRA8Q9BRK3 442 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 TRAIPQ9BWF2 469 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 AGO4Q9HCK5 861 aaKnown RBP11.81□□□□□ -0.52
TRAV33-201ENST00000557514 SH2B1Q9NRF2 756 aaPredicted RBP11.81□□□□□ -0.52
TRAV33-201ENST00000557514 DACT1Q9NYF0 836 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRAV33-201ENST00000557514 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
TRAV33-201ENST00000557514 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.81□□□□□ -0.52
TRAV33-201ENST00000557514 SMG1Q96Q15 3661 aaKnown RBP11.81□□□□□ -0.52
TRAV33-201ENST00000557514 SETXQ7Z333 2677 aaKnown RBP11.81□□□□□ -0.52
TRAV33-201ENST00000557514 LRP3O75074 770 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 RFPL2O75678 378 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 ATP4AP20648 1035 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 NLRP11P59045 1033 aaKnown RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 PRKCQQ04759 706 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 MLF2Q15773 248 aaPredicted RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 ELMSAN1Q6PJG2 1045 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 GET4Q7L5D6 327 aaPredicted RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 SMG7Q92540 1137 aaKnown RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 MAP7D2Q96T17 732 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 LTB4R2Q9NPC1 389 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 MRPL17Q9NRX2 175 aaKnown RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 DNAJB4Q9UDY4 337 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 SEC63Q9UGP8 760 aaKnown RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 DPP7Q9UHL4 492 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 PCDHA6Q9UN73 950 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 MTF2Q9Y483 593 aaPredicted RBP11.8□□□□□ -0.52
TRAV33-201ENST00000557514 PCDHA8Q9Y5H6 950 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 WDFY3Q8IZQ1 3526 aa11.8□□□□□ -0.52
TRAV33-201ENST00000557514 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.79□□□□□ -0.52
TRAV33-201ENST00000557514 TEX28O15482 410 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 GLUD1P00367 558 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 SSBP05455 408 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRAV33-201ENST00000557514 ADH1AP07327 375 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 PHKA2P46019 1235 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 GPC5P78333 572 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 SPEM2Q0P670 501 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 SNW1Q13573 536 aaKnown RBP11.79□□□□□ -0.52
TRAV33-201ENST00000557514 UBXN2BQ14CS0 331 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 NOMO2Q5JPE7 1267 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 RSPO2Q6UXX9 243 aaPredicted RBP11.79□□□□□ -0.52
TRAV33-201ENST00000557514 CLDN23Q96B33 292 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 RPS6KC1Q96S38 1066 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms