RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
TUBB3-214ENST00000557490 LINC01599Q8WXQ3 324 aa17.67■□□□□ 0.42
TUBB3-214ENST00000557490 NLRP4Q96MN2 994 aa17.67■□□□□ 0.42
TUBB3-214ENST00000557490 INO80BQ9C086 356 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-214ENST00000557490 ATP6V0A4Q9HBG4 840 aa17.67■□□□□ 0.42
TUBB3-214ENST00000557490 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-214ENST00000557490 DBR1Q9UK59 544 aaKnown RBP17.67■□□□□ 0.42
TUBB3-214ENST00000557490 COG5Q9UP83 839 aa17.67■□□□□ 0.42
TUBB3-214ENST00000557490 COL4A3BPQ9Y5P4 624 aa17.67■□□□□ 0.42
TUBB3-214ENST00000557490 EVPLQ92817 2033 aa17.67■□□□□ 0.42
TUBB3-214ENST00000557490 SIP14410 1827 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 A0A087WZ62 844 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 LCHNA4D1U4 455 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 ASAP2O43150 1006 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 STAG3L1P0CL83 205 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 IL17AQ16552 155 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 ARL6IP4Q66PJ3 421 aaKnown RBP17.66■□□□□ 0.42
TUBB3-214ENST00000557490 KSR1Q8IVT5 923 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 PRPF31Q8WWY3 499 aaKnown RBP17.66■□□□□ 0.42
TUBB3-214ENST00000557490 ADAM2Q99965 735 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 FDXACB1Q9BRP7 624 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-214ENST00000557490 CD320Q9NPF0 282 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 C1orf112Q9NSG2 853 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 LRFN2Q9ULH4 789 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 MTCH2Q9Y6C9 303 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 ZDBF2Q9HCK1 2354 aa17.66■□□□□ 0.42
TUBB3-214ENST00000557490 MICAL3Q7RTP6 2002 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 ARHGEF35A5YM69 484 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 STX6O43752 255 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 USO1O60763 962 aaKnown RBP17.65■□□□□ 0.42
TUBB3-214ENST00000557490 SRGAP2CP0DJJ0 459 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 ZSCAN20P17040 1043 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-214ENST00000557490 POU3F3P20264 500 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-214ENST00000557490 IBSPP21815 317 aaPredicted RBP17.65■□□□□ 0.42
TUBB3-214ENST00000557490 SFPQP23246 707 aaKnown RBP eCLIP17.65■□□□□ 0.42
TUBB3-214ENST00000557490 SARSP49591 514 aaKnown RBP17.65■□□□□ 0.42
TUBB3-214ENST00000557490 LAMTOR4Q0VGL1 99 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 RESTQ13127 1097 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 NPAS4Q8IUM7 802 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 CERS4Q9HA82 394 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 RGS18Q9NS28 235 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 MTMR6Q9Y217 621 aa17.65■□□□□ 0.42
TUBB3-214ENST00000557490 LINC01553A4QN01 128 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 VWA3AA6NCI4 1184 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 MGEA5O60502 916 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 ARHGEF15O94989 841 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 TFDP1Q14186 410 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 MXD4Q14582 209 aaPredicted RBP17.64■□□□□ 0.41
TUBB3-214ENST00000557490 SLC24A5Q71RS6 500 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 MCPH1Q8NEM0 835 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 SP7Q8TDD2 431 aaPredicted RBP17.64■□□□□ 0.41
TUBB3-214ENST00000557490 ARNTL2Q8WYA1 636 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 TGS1Q96RS0 853 aaKnown RBP17.64■□□□□ 0.41
TUBB3-214ENST00000557490 XPNPEP1Q9NQW7 623 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 KIAA1024Q9UPX6 916 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 PCDHB7Q9Y5E2 793 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 ZNF318Q5VUA4 2279 aa17.64■□□□□ 0.41
TUBB3-214ENST00000557490 PP2D1A8MPX8 630 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 RFXAPO00287 272 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 GTPBP6O43824 516 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-214ENST00000557490 CSDE1O75534 798 aaKnown RBP17.63■□□□□ 0.41
TUBB3-214ENST00000557490 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
TUBB3-214ENST00000557490 FGFR4P22455 802 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 DSC3Q14574 896 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 SF3A1Q15459 793 aaKnown RBP17.63■□□□□ 0.41
TUBB3-214ENST00000557490 ECM1Q16610 540 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 PADI6Q6TGC4 694 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 CATSPER4Q7RTX7 472 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 SRGAP1Q7Z6B7 1085 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 RNF149Q8NC42 400 aa17.63■□□□□ 0.41
TUBB3-214ENST00000557490 ZSCAN16Q9H4T2 348 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-214ENST00000557490 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
TUBB3-214ENST00000557490 DGKIO75912 1065 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 CDC25AP30304 524 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 ARL2P36404 184 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 PHKA2P46019 1235 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 ERVK-21P61565 698 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 ZRSR1Q15695 479 aaKnown RBP17.62■□□□□ 0.41
TUBB3-214ENST00000557490 MAEAQ7L5Y9 396 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 FIBCD1Q8N539 461 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 HLA-CQ95604 372 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 POLR3FQ9H1D9 316 aaPredicted RBP17.62■□□□□ 0.41
TUBB3-214ENST00000557490 IFT122Q9HBG6 1241 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 CHST12Q9NRB3 414 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 DACT1Q9NYF0 836 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 MTUS1Q9ULD2 1270 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 DNM3Q9UQ16 869 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 PTPRSQ13332 1948 aa17.62■□□□□ 0.41
TUBB3-214ENST00000557490 CFAP54Q96N23 3096 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 C9IYK1 514 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 CYP11B2P19099 503 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 FAM189BP81408 668 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 BTG3Q14201 252 aaPredicted RBP17.61■□□□□ 0.41
TUBB3-214ENST00000557490 FAM102BQ5T8I3 360 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 ASAP3Q8TDY4 903 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 CDK5RAP3Q96JB5 506 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 AK8Q96MA6 479 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 SAMD11Q96NU1 681 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 BHMT2Q9H2M3 363 aa17.61■□□□□ 0.41
TUBB3-214ENST00000557490 CLIC4Q9Y696 253 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms