RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 GOLGA8BA8MQT2 603 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 ATP2A2P16615 1042 aaKnown RBP6.25□□□□□ -1.41
VRK1-207ENST00000557352 MCM7P33993 719 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 ADCY2Q08462 1091 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 TUBA3CQ13748 450 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 RRP1BQ14684 758 aaKnown RBP6.25□□□□□ -1.41
VRK1-207ENST00000557352 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 FNDC7Q5VTL7 733 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 TUBA3EQ6PEY2 450 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 FAM111BQ6SJ93 734 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 PHYKPLQ8IUZ5 450 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 ANKRD35Q8N283 1001 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 PLA2G15Q8NCC3 412 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 RNPC3Q96LT9 517 aaKnown RBP6.25□□□□□ -1.41
VRK1-207ENST00000557352 PITHD1Q9GZP4 211 aaPredicted RBP6.25□□□□□ -1.41
VRK1-207ENST00000557352 TOMM22Q9NS69 142 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 H2AFY2Q9P0M6 372 aaPredicted RBP6.25□□□□□ -1.41
VRK1-207ENST00000557352 CD2APQ9Y5K6 639 aa6.25□□□□□ -1.41
VRK1-207ENST00000557352 A0A0A6YYJ9 748 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 FAM83GA6ND36 823 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 TOX4O94842 621 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 PRPF6O94906 941 aaKnown RBP6.24□□□□□ -1.41
VRK1-207ENST00000557352 VSIG10L2P0DP72 767 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 HNRNPLP14866 589 aaKnown RBP eCLIP6.24□□□□□ -1.41
VRK1-207ENST00000557352 CRHR2Q13324 411 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 TCEA2Q15560 299 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 C21orf62-AS1Q17RA5 79 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 CRB2Q5IJ48 1285 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 TIGD7Q6NT04 549 aaPredicted RBP6.24□□□□□ -1.41
VRK1-207ENST00000557352 UNQ6494/PRO21346Q6UXR6 183 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 C7orf31Q8N865 590 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 RTF1Q92541 710 aaKnown RBP6.24□□□□□ -1.41
VRK1-207ENST00000557352 MIEF2Q96C03 454 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 MYL10Q9BUA6 226 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 MTG2Q9H4K7 406 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 IL23AQ9NPF7 189 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 ZKSCAN5Q9Y2L8 839 aa6.24□□□□□ -1.41
VRK1-207ENST00000557352 KPNA6O60684 536 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 APOL3O95236 402 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 F2P00734 622 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 SCNN1GP51170 649 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 KIAA1841Q6NSI8 718 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 Q6ZRM9 215 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 KIF18BQ86Y91 864 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 ZZZ3Q8IYH5 903 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 NXPE1Q8N323 547 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 TCF25Q9BQ70 676 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 MTFR1LQ9H019 292 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 POFUT1Q9H488 388 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 ZMAT4Q9H898 229 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 IFT57Q9NWB7 429 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 PARPBPQ9NWS1 579 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 SYNPO2Q9UMS6 1093 aa6.23□□□□□ -1.41
VRK1-207ENST00000557352 ZNF891A8MT65 544 aaPredicted RBP6.22□□□□□ -1.41
VRK1-207ENST00000557352 DAPK3O43293 454 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 GAS7O60861 476 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 POU3F2P20265 443 aaPredicted RBP6.22□□□□□ -1.41
VRK1-207ENST00000557352 NEK4P51957 841 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 TGFB2P61812 414 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 DSG1Q02413 1049 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 ELAVL1Q15717 326 aaKnown RBP6.22□□□□□ -1.41
VRK1-207ENST00000557352 KRT40Q6A162 431 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 HOMER1Q86YM7 354 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 AMER2Q8N7J2 671 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 TRIM8Q9BZR9 551 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 MMRN2Q9H8L6 949 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 RCAN3Q9UKA8 241 aa6.22□□□□□ -1.41
VRK1-207ENST00000557352 A0A0A6YYK5 440 aaPredicted RBP6.21□□□□□ -1.42
VRK1-207ENST00000557352 MAFGO15525 162 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 OPHN1O60890 802 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 JUNP05412 331 aaKnown RBP6.21□□□□□ -1.42
VRK1-207ENST00000557352 KIR2DL3P43628 341 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 TKFCQ3LXA3 575 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 C16orf86Q6ZW13 317 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 LRRTM3Q86VH5 581 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 GSPT2Q8IYD1 628 aaKnown RBP6.21□□□□□ -1.42
VRK1-207ENST00000557352 EFHBQ8N7U6 833 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 CHTF18Q8WVB6 975 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 NOL10Q9BSC4 688 aaKnown RBP6.21□□□□□ -1.42
VRK1-207ENST00000557352 SOX7Q9BT81 388 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 OSBPL6Q9BZF3 934 aa6.21□□□□□ -1.42
VRK1-207ENST00000557352 C14orf93Q9H972 538 aaKnown RBP6.21□□□□□ -1.42
VRK1-207ENST00000557352 MAN2A2P49641 1150 aa6.2□□□□□ -1.42
VRK1-207ENST00000557352 SMAD3P84022 425 aaKnown RBP6.2□□□□□ -1.42
VRK1-207ENST00000557352 CNGB1Q14028 1251 aaPredicted RBP6.2□□□□□ -1.42
VRK1-207ENST00000557352 LRRC32Q14392 662 aa6.2□□□□□ -1.42
VRK1-207ENST00000557352 FKBP15Q5T1M5 1219 aa6.2□□□□□ -1.42
VRK1-207ENST00000557352 ZNF483Q8TF39 744 aaPredicted RBP6.2□□□□□ -1.42
VRK1-207ENST00000557352 NEU4Q8WWR8 484 aaPredicted RBP6.2□□□□□ -1.42
VRK1-207ENST00000557352 NINJ1Q92982 152 aa6.2□□□□□ -1.42
VRK1-207ENST00000557352 THG1LQ9NWX6 298 aaKnown RBP6.2□□□□□ -1.42
VRK1-207ENST00000557352 ELL2O00472 640 aaPredicted RBP6.19□□□□□ -1.42
VRK1-207ENST00000557352 TGM5O43548 720 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 MAKP20794 623 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 CD40P25942 277 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 RABGGTBP53611 331 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 SLC25A3Q00325 362 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 DPTQ07507 201 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 MAN2A1Q16706 1144 aa6.19□□□□□ -1.42
VRK1-207ENST00000557352 CNNM4Q6P4Q7 775 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms