RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 HYIQ5T013 277 aa13.87□□□□□ -0.19
SLIRP-209ENST00000557342 PADI6Q6TGC4 694 aa13.87□□□□□ -0.19
SLIRP-209ENST00000557342 CATSPER4Q7RTX7 472 aa13.87□□□□□ -0.19
SLIRP-209ENST00000557342 RNF149Q8NC42 400 aa13.87□□□□□ -0.19
SLIRP-209ENST00000557342 SAMD11Q96NU1 681 aa13.87□□□□□ -0.19
SLIRP-209ENST00000557342 TGS1Q96RS0 853 aaKnown RBP13.87□□□□□ -0.19
SLIRP-209ENST00000557342 GAS2L1Q99501 681 aaPredicted RBP13.87□□□□□ -0.19
SLIRP-209ENST00000557342 MMTAG2Q9BU76 263 aaKnown RBP13.87□□□□□ -0.19
SLIRP-209ENST00000557342 BHMT2Q9H2M3 363 aa13.87□□□□□ -0.19
SLIRP-209ENST00000557342 CLIC4Q9Y696 253 aa13.87□□□□□ -0.19
SLIRP-209ENST00000557342 MYO9BQ13459 2157 aa13.87□□□□□ -0.19
SLIRP-209ENST00000557342 COL4A4P53420 1690 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-209ENST00000557342 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 LINC01553A4QN01 128 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 C9IYK1 514 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 MGEA5O60502 916 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 DGKIO75912 1065 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 UBA7P41226 1012 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 FAM189BP81408 668 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 BECN1Q14457 450 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 PTPAQ15257 358 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 CABP7Q86V35 215 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 MYLIPQ8WY64 445 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 ZNF396Q96N95 335 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-209ENST00000557342 NFKBIZQ9BYH8 718 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 POLR3FQ9H1D9 316 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-209ENST00000557342 PRDM12Q9H4Q4 367 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 ELAC1Q9H777 363 aaKnown RBP13.86□□□□□ -0.19
SLIRP-209ENST00000557342 MORC2Q9Y6X9 1032 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-209ENST00000557342 SZT2Q5T011 3432 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 ADGRA3Q8IWK6 1321 aa13.86□□□□□ -0.19
SLIRP-209ENST00000557342 HOXA2O43364 376 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 CSDE1O75534 798 aaKnown RBP13.85□□□□□ -0.19
SLIRP-209ENST00000557342 ERLIN2O94905 339 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 ZSCAN22P10073 491 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-209ENST00000557342 SKIP12755 728 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 FOSL2P15408 326 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 FGFR4P22455 802 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 GLRA2P23416 452 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 PTENP60484 403 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 ERVK-21P61565 698 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 NCBP1Q09161 790 aaKnown RBP13.85□□□□□ -0.19
SLIRP-209ENST00000557342 ZRSR1Q15695 479 aaKnown RBP13.85□□□□□ -0.19
SLIRP-209ENST00000557342 FAM102BQ5T8I3 360 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 FAM173BQ6P4H8 233 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 MAEAQ7L5Y9 396 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-209ENST00000557342 FIBCD1Q8N539 461 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 ASAP3Q8TDY4 903 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-209ENST00000557342 TMEM161AQ9NX61 479 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 RWDD3Q9Y3V2 267 aa13.85□□□□□ -0.19
SLIRP-209ENST00000557342 A0A0U1RQF3 1178 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 E9PMD0 336 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 ARHGEF15O94989 841 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 EOMESO95936 686 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 AXLP30530 894 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 CEBPZQ03701 1054 aaKnown RBP13.84□□□□□ -0.19
SLIRP-209ENST00000557342 CAPSQ13938 189 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 BTG3Q14201 252 aaPredicted RBP13.84□□□□□ -0.19
SLIRP-209ENST00000557342 PPP2R5AQ15172 486 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 TWF2Q6IBS0 349 aaKnown RBP13.84□□□□□ -0.19
SLIRP-209ENST00000557342 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
SLIRP-209ENST00000557342 RASSF8Q8NHQ8 419 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 ARNTL2Q8WYA1 636 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 KIFAP3Q92845 792 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 PNMA5Q96PV4 448 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 USP28Q96RU2 1077 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 TIPINQ9BVW5 301 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 TRAIPQ9BWF2 469 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 C2orf40Q9H1Z8 148 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
SLIRP-209ENST00000557342 AGPAT5Q9NUQ2 364 aa13.84□□□□□ -0.19
SLIRP-209ENST00000557342 PIN4Q9Y237 131 aaKnown RBP13.84□□□□□ -0.19
SLIRP-209ENST00000557342 SRPRBQ9Y5M8 271 aaKnown RBP13.84□□□□□ -0.19
SLIRP-209ENST00000557342 LAMA2P24043 3122 aaKnown RBP13.83□□□□□ -0.2
SLIRP-209ENST00000557342 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 INO80B-WBP1J3KQ70 363 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 F13A1P00488 732 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 IBSPP21815 317 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-209ENST00000557342 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-209ENST00000557342 TXLNAP40222 546 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 NASPP49321 788 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-209ENST00000557342 RAB27AP51159 221 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 GRB10Q13322 594 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 SLC39A14Q15043 492 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 STK38Q15208 465 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 TMEM119Q4V9L6 283 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 ATL3Q6DD88 541 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 ECHDC2Q86YB7 292 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 ZBTB8OSQ8IWT0 167 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 SYT2Q8N9I0 419 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-209ENST00000557342 IFT74Q96LB3 600 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 CERS4Q9HA82 394 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 GPRC5CQ9NQ84 441 aa13.83□□□□□ -0.2
SLIRP-209ENST00000557342 KCND2Q9NZV8 630 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms