RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 JPH2Q9BR39 696 aaPredicted RBP17.84■□□□□ 0.45
TUBB3-213ENST00000557262 KCNMB3Q9NPA1 279 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 SUCLA2Q9P2R7 463 aaPredicted RBP17.84■□□□□ 0.45
TUBB3-213ENST00000557262 TPCN1Q9ULQ1 816 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 BARX2Q9UMQ3 279 aaPredicted RBP17.84■□□□□ 0.45
TUBB3-213ENST00000557262 PLXNA4Q9HCM2 1894 aa17.84■□□□□ 0.45
TUBB3-213ENST00000557262 STK36Q9NRP7 1315 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 A0A087WZ62 844 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 EML1O00423 815 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 DKC1O60832 514 aaKnown RBP eCLIP17.83■□□□□ 0.44
TUBB3-213ENST00000557262 NEFLP07196 543 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 GCFC2P16383 781 aaKnown RBP17.83■□□□□ 0.44
TUBB3-213ENST00000557262 PPM1AP35813 382 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 QARSP47897 775 aaKnown RBP17.83■□□□□ 0.44
TUBB3-213ENST00000557262 CLLU1OSQ5K130 101 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 ZNF410Q86VK4 478 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 RHPN2Q8IUC4 686 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 RNF135Q8IUD6 432 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 FDXACB1Q9BRP7 624 aaPredicted RBP17.83■□□□□ 0.44
TUBB3-213ENST00000557262 TRAIPQ9BWF2 469 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 NGRNQ9NPE2 291 aaKnown RBP17.83■□□□□ 0.44
TUBB3-213ENST00000557262 SPG21Q9NZD8 308 aa17.83■□□□□ 0.44
TUBB3-213ENST00000557262 TBX3O15119 743 aa17.82■□□□□ 0.44
TUBB3-213ENST00000557262 P4HBP07237 508 aaKnown RBP17.82■□□□□ 0.44
TUBB3-213ENST00000557262 SFPQP23246 707 aaKnown RBP eCLIP17.82■□□□□ 0.44
TUBB3-213ENST00000557262 HERC4Q5GLZ8 1057 aaPredicted RBP17.82■□□□□ 0.44
TUBB3-213ENST00000557262 TMEM184AQ6ZMB5 413 aa17.82■□□□□ 0.44
TUBB3-213ENST00000557262 HELQQ8TDG4 1101 aa17.82■□□□□ 0.44
TUBB3-213ENST00000557262 NAP1L4Q99733 375 aaKnown RBP17.82■□□□□ 0.44
TUBB3-213ENST00000557262 TCF25Q9BQ70 676 aa17.82■□□□□ 0.44
TUBB3-213ENST00000557262 ENTPD7Q9NQZ7 604 aa17.82■□□□□ 0.44
TUBB3-213ENST00000557262 CYP26B1Q9NR63 512 aa17.82■□□□□ 0.44
TUBB3-213ENST00000557262 USP15Q9Y4E8 981 aaPredicted RBP17.82■□□□□ 0.44
TUBB3-213ENST00000557262 MARCH6O60337 910 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 CCNT1O60563 726 aaKnown RBP17.81■□□□□ 0.44
TUBB3-213ENST00000557262 SKIP12755 728 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 ATF7P17544 494 aaPredicted RBP17.81■□□□□ 0.44
TUBB3-213ENST00000557262 ANAPC15P60006 121 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
TUBB3-213ENST00000557262 KCNC3Q14003 757 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 ANKRD1Q15327 319 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 PLPP4Q5VZY2 271 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 PIK3AP1Q6ZUJ8 805 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 TMC7Q7Z402 723 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 EXOC8Q8IYI6 725 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 VN1R2Q8NFZ6 395 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 OXER1Q8TDS5 423 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 WASF1Q92558 559 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 MRPL9Q9BYD2 267 aaKnown RBP17.81■□□□□ 0.44
TUBB3-213ENST00000557262 GJB4Q9NTQ9 266 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 MUTYHQ9UIF7 546 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 VAV3Q9UKW4 847 aa17.81■□□□□ 0.44
TUBB3-213ENST00000557262 LOC730098B7Z3J9 87 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 CTDNEP1O95476 244 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 SRGAP2BP0DMP2 458 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 PBX3P40426 434 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 PHKA2P46019 1235 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 ALDH7A1P49419 539 aaKnown RBP17.8■□□□□ 0.44
TUBB3-213ENST00000557262 NPEPPSP55786 919 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 EPHA7Q15375 998 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 PLA2G4FQ68DD2 849 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 TWF2Q6IBS0 349 aaKnown RBP17.8■□□□□ 0.44
TUBB3-213ENST00000557262 KSR1Q8IVT5 923 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 SLC39A11Q8N1S5 342 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 RSPH1Q8WYR4 309 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 HAS1Q92839 578 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 CEP170P1Q96L14 293 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 PHF7Q9BWX1 381 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-213ENST00000557262 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
TUBB3-213ENST00000557262 PPME1Q9Y570 386 aa17.8■□□□□ 0.44
TUBB3-213ENST00000557262 HIDE1A8MVS5 230 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 DTNBO60941 627 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 ZNF623O75123 536 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 BAG4O95429 457 aaKnown RBP17.79■□□□□ 0.44
TUBB3-213ENST00000557262 AK2P54819 239 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 CBX2Q14781 532 aaPredicted RBP17.79■□□□□ 0.44
TUBB3-213ENST00000557262 ANKRD54Q6NXT1 300 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 OTUD6AQ7L8S5 288 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 CATSPER4Q7RTX7 472 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 C4orf19Q8IY42 314 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 MRPL43Q8N983 215 aaKnown RBP17.79■□□□□ 0.44
TUBB3-213ENST00000557262 ZNF579Q8NAF0 562 aaKnown RBP17.79■□□□□ 0.44
TUBB3-213ENST00000557262 SLC7A3Q8WY07 619 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 NLRP4Q96MN2 994 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 S1PR5Q9H228 398 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 DHX33Q9H6R0 707 aaKnown RBP17.79■□□□□ 0.44
TUBB3-213ENST00000557262 IFT122Q9HBG6 1241 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 PIN4Q9Y237 131 aaKnown RBP17.79■□□□□ 0.44
TUBB3-213ENST00000557262 TRIOO75962 3097 aa17.79■□□□□ 0.44
TUBB3-213ENST00000557262 CARNS1A5YM72 827 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 NT5C1B-RDH14C9J2C7 533 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 FDPSP14324 419 aaKnown RBP17.78■□□□□ 0.44
TUBB3-213ENST00000557262 TECP42680 631 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 RAB27AP51159 221 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 BCAR1P56945 870 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 BMS1Q14692 1282 aaKnown RBP17.78■□□□□ 0.44
TUBB3-213ENST00000557262 SLFN12Q8IYM2 578 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 PRPF31Q8WWY3 499 aaKnown RBP17.78■□□□□ 0.44
TUBB3-213ENST00000557262 SUSD6Q92537 303 aa17.78■□□□□ 0.44
TUBB3-213ENST00000557262 EDAQ92838 391 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms