RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 RTN4RL1Q86UN2 441 aaPredicted RBP9.88□□□□□ -0.83
VRK1-206ENST00000557222 EFHBQ8N7U6 833 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 SPPL3Q8TCT6 385 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 MSLNLQ96KJ4 702 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 MYL10Q9BUA6 226 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 CELF4Q9BZC1 486 aaKnown RBP9.88□□□□□ -0.83
VRK1-206ENST00000557222 AGO3Q9H9G7 860 aaKnown RBP9.88□□□□□ -0.83
VRK1-206ENST00000557222 RBM28Q9NW13 759 aaKnown RBP9.88□□□□□ -0.83
VRK1-206ENST00000557222 PADI3Q9ULW8 664 aa9.88□□□□□ -0.83
VRK1-206ENST00000557222 SUPT16HQ9Y5B9 1047 aaKnown RBP9.88□□□□□ -0.83
VRK1-206ENST00000557222 CACNA1HO95180 2353 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 ZDBF2Q9HCK1 2354 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 IGKV6D-21A0A0A0MT36 114 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 MEIS1O00470 390 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 HBP1O60381 514 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 ITGB1P05556 798 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 SCG2P13521 617 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 CTSOP43234 321 aaPredicted RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 MCCD1P59942 119 aaPredicted RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 ACTR2P61160 394 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 COASYQ13057 564 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 PAK2Q13177 524 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 PLCB4Q15147 1175 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 NECTIN1Q15223 517 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 UBE2SQ16763 222 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 CEP55Q53EZ4 464 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 PDE12Q6L8Q7 609 aaKnown RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 KDF1Q8NAX2 398 aaPredicted RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 LINC01599Q8WXQ3 324 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 UIMC1Q96RL1 719 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 INSM2Q96T92 566 aaPredicted RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 LSG1Q9H089 658 aaKnown RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 ZNF395Q9H8N7 513 aaPredicted RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 ALG13Q9NP73 1137 aaKnown RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 RIC8AQ9NPQ8 531 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 C1orf112Q9NSG2 853 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 MRPL42Q9Y6G3 142 aaKnown RBP9.87□□□□□ -0.83
VRK1-206ENST00000557222 COL1A2P08123 1366 aa9.87□□□□□ -0.83
VRK1-206ENST00000557222 STXBP3O00186 592 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 SLC27A2O14975 620 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 TBX10O75333 385 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 TECTAO75443 2155 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 SREBF1P36956 1147 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 SARSP49591 514 aaKnown RBP9.86□□□□□ -0.83
VRK1-206ENST00000557222 RCAN1P53805 252 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 IGBP1P78318 339 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 KRT76Q01546 638 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 DLX2Q07687 328 aaPredicted RBP9.86□□□□□ -0.83
VRK1-206ENST00000557222 AP3B2Q13367 1082 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 CBX2Q14781 532 aaPredicted RBP9.86□□□□□ -0.83
VRK1-206ENST00000557222 ZNF484Q5JVG2 852 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 CREB3L3Q68CJ9 461 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 MCTP2Q6DN12 878 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 MTHFD1LQ6UB35 978 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 HEATR3Q7Z4Q2 680 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 RNF135Q8IUD6 432 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 CMTR1Q8N1G2 835 aaKnown RBP9.86□□□□□ -0.83
VRK1-206ENST00000557222 KLHL23Q8NBE8 558 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 SMRP1Q8NCR6 262 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 POF1BQ8WVV4 589 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 EDAQ92838 391 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 CDCA3Q99618 268 aaPredicted RBP9.86□□□□□ -0.83
VRK1-206ENST00000557222 PRRX2Q99811 253 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 FAM49AQ9H0Q0 323 aaPredicted RBP9.86□□□□□ -0.83
VRK1-206ENST00000557222 AGO4Q9HCK5 861 aaKnown RBP9.86□□□□□ -0.83
VRK1-206ENST00000557222 LRFN2Q9ULH4 789 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 PCDHB12Q9Y5F1 795 aa9.86□□□□□ -0.83
VRK1-206ENST00000557222 LOC730098B7Z3J9 87 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 GPR182O15218 404 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 ARP10275 920 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 ATF7P17544 494 aaPredicted RBP9.85□□□□□ -0.83
VRK1-206ENST00000557222 DNAJB1P25685 340 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 KLRC1P26715 233 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 NDUFV1P49821 464 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 NAPAP54920 295 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 FAM189BP81408 668 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 INSM1Q01101 510 aaPredicted RBP9.85□□□□□ -0.83
VRK1-206ENST00000557222 NHLH1Q02575 133 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 TSGA10IPQ3SY00 556 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 RNF20Q5VTR2 975 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 FAM160B1Q5W0V3 765 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 ABHD15Q6UXT9 468 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 SLC24A5Q71RS6 500 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 ALYREFQ86V81 257 aaKnown RBP9.85□□□□□ -0.83
VRK1-206ENST00000557222 ATP8B4Q8TF62 1192 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 ZNF592Q92610 1267 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 FBXL18Q96ME1 805 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 ESYT1Q9BSJ8 1104 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 ANO3Q9BYT9 981 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 TMX1Q9H3N1 280 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 IGFLR1Q9H665 355 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 ELAC1Q9H777 363 aaKnown RBP9.85□□□□□ -0.83
VRK1-206ENST00000557222 ERVK-5Q9HDB9 667 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 RGS18Q9NS28 235 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 BARHL2Q9NY43 387 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 CLEC1BQ9P126 229 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 LZTS1Q9Y250 596 aa9.85□□□□□ -0.83
VRK1-206ENST00000557222 PCDHB7Q9Y5E2 793 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms