RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 RSPH10B2B2RC85 870 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 H0YCG3 227 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 M0QZ92 97 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 KLRC4O43908 158 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 B4GALT4O60513 344 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 RSPH10BP0C881 870 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 MAPTP10636 758 aaKnown RBP10.75□□□□□ -0.69
TMEM260-213ENST00000556929 PLS3P13797 630 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 ABCD1P33897 745 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 NAMPTP43490 491 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 ZNF131P52739 623 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 SOX10P56693 466 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 MAPK7Q13164 816 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 DMP1Q13316 513 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-213ENST00000556929 HIC1Q14526 733 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 SNX17Q15036 470 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 KMT5BQ4FZB7 885 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 ODR4Q5SWX8 454 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 IER5LQ5T953 404 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 NT5DC1Q5TFE4 455 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 STXBP4Q6ZWJ1 553 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 SERINC5Q86VE9 423 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 RHPN2Q8IUC4 686 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 FAM178BQ8IXR5 827 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 FAM126BQ8IXS8 530 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 TNS4Q8IZW8 715 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 LINC01465Q8N7H1 131 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 TRIML1Q8N9V2 468 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 PRPF31Q8WWY3 499 aaKnown RBP10.75□□□□□ -0.69
TMEM260-213ENST00000556929 TOX2Q96NM4 488 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 FAM49AQ9H0Q0 323 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-213ENST00000556929 POLD4Q9HCU8 107 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 GPRC5CQ9NQ84 441 aa10.75□□□□□ -0.69
TMEM260-213ENST00000556929 TRMT13Q9NUP7 481 aaKnown RBP10.75□□□□□ -0.69
TMEM260-213ENST00000556929 CCDC85CA6NKD9 419 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 CCDC169A6NNP5 214 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 PQBP1O60828 265 aaKnown RBP10.74□□□□□ -0.69
TMEM260-213ENST00000556929 CAND2O75155 1236 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 RHOBTB3O94955 611 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 KIF20AO95235 890 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 CD4P01730 458 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 VTNP04004 478 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 SCP2P22307 547 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 GLRA2P23416 452 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 SARSP49591 514 aaKnown RBP10.74□□□□□ -0.69
TMEM260-213ENST00000556929 PEX3P56589 373 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 POU5F1BQ06416 359 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 LAMTOR4Q0VGL1 99 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 COASYQ13057 564 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 DRP2Q13474 957 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 FAM26FQ5R3K3 315 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 SASS6Q6UVJ0 657 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 RUFY4Q6ZNE9 571 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 RBM43Q6ZSC3 357 aaKnown RBP10.74□□□□□ -0.69
TMEM260-213ENST00000556929 ANKRD33Q7Z3H0 272 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 RPAINQ86UA6 219 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 ZNF410Q86VK4 478 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 ZBTB8OSQ8IWT0 167 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 KIAA0319LQ8IZA0 1049 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 DAW1Q8N136 415 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 SPATA20Q8TB22 786 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 DEPTORQ8TB45 409 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 CAGE1Q8TC20 777 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 SPIRE2Q8WWL2 714 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 ERCC4Q92889 916 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-213ENST00000556929 ZBTB10Q96DT7 871 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 SCLT1Q96NL6 688 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 NTPCRQ9BSD7 190 aaKnown RBP10.74□□□□□ -0.69
TMEM260-213ENST00000556929 TRPV6Q9H1D0 765 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 C2orf40Q9H1Z8 148 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 MRPL44Q9H9J2 332 aaKnown RBP10.74□□□□□ -0.69
TMEM260-213ENST00000556929 KMT5AQ9NQR1 393 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 OLFML3Q9NRN5 406 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-213ENST00000556929 ATP11BQ9Y2G3 1177 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 PHLPP2Q6ZVD8 1323 aa10.74□□□□□ -0.69
TMEM260-213ENST00000556929 TANC1Q9C0D5 1861 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 LRRIQ4A6NIV6 560 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 K7ENM7 598 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 SRGAP2CP0DJJ0 459 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 PPP1R2P41236 205 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 PHKA2P46019 1235 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 NPTX2P47972 431 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 GPC3P51654 580 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 NCKAP1LP55160 1127 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 NLRP11P59045 1033 aaKnown RBP10.73□□□□□ -0.69
TMEM260-213ENST00000556929 MRPS6P82932 125 aaKnown RBP10.73□□□□□ -0.69
TMEM260-213ENST00000556929 BFSP2Q13515 415 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 ALCAMQ13740 583 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 CAPSQ13938 189 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 TRIM60Q495X7 471 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 ZNF658Q5TYW1 1059 aaPredicted RBP10.73□□□□□ -0.69
TMEM260-213ENST00000556929 SFR1Q86XK3 245 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 RNF149Q8NC42 400 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 ASAP3Q8TDY4 903 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 NLRP7Q8WX94 980 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 NLRP4Q96MN2 994 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 ANP32EQ9BTT0 268 aa10.73□□□□□ -0.69
TMEM260-213ENST00000556929 GCOM2Q9BZD3 368 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms