RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 SLC7A3Q8WY07 619 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 PPP2R3CQ969Q6 453 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 MRPL38Q96DV4 380 aaKnown RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 ZSCAN31Q96LW9 406 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 MBOAT7Q96N66 472 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 OSMRQ99650 979 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 ADAM2Q99965 735 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 PLVAPQ9BX97 442 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 OSBPL7Q9BZF2 842 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 INO80BQ9C086 356 aaPredicted RBP8.22□□□□□ -1.09
SCFD1-222ENST00000556768 AAASQ9NRG9 546 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 PCDHA12Q9UN75 941 aa8.22□□□□□ -1.09
SCFD1-222ENST00000556768 MYO9BQ13459 2157 aa8.21□□□□□ -1.09
SCFD1-222ENST00000556768 NCK2O43639 380 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 ZNF862O60290 1169 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 DGKIO75912 1065 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 BMPR1AP36894 532 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 SARSP49591 514 aaKnown RBP8.21□□□□□ -1.1
SCFD1-222ENST00000556768 CLCN3P51790 818 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 HMGN5P82970 282 aaKnown RBP8.21□□□□□ -1.1
SCFD1-222ENST00000556768 PPP2R5CQ13362 524 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 NPY5RQ15761 445 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 MTERF2Q49AM1 385 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 TIGD5Q53EQ6 642 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 NAALADL2Q58DX5 795 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 KRT40Q6A162 431 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 ABI1Q8IZP0 508 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 LRRC71Q8N4P6 559 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 GJA10Q969M2 543 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 CCDC43Q96MW1 224 aaKnown RBP8.21□□□□□ -1.1
SCFD1-222ENST00000556768 PPP1R16BQ96T49 567 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 LLPHQ9BRT6 129 aaKnown RBP8.21□□□□□ -1.1
SCFD1-222ENST00000556768 NIFKQ9BYG3 293 aaKnown RBP8.21□□□□□ -1.1
SCFD1-222ENST00000556768 GCOM2Q9BZD3 368 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-222ENST00000556768 ATP6V0A4Q9HBG4 840 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 PRDM6Q9NQX0 595 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-222ENST00000556768 RGS18Q9NS28 235 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 DACT1Q9NYF0 836 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 NOC2LQ9Y3T9 749 aaKnown RBP8.21□□□□□ -1.1
SCFD1-222ENST00000556768 KIF3AQ9Y496 699 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 PPME1Q9Y570 386 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 PCDHB12Q9Y5F1 795 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 ADGRA3Q8IWK6 1321 aa8.21□□□□□ -1.1
SCFD1-222ENST00000556768 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 ST18O60284 1047 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 LPXNO60711 386 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 GPR32O75388 356 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 CTDNEP1O95476 244 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 MMP1P03956 469 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 NR5A1Q13285 461 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 CALCRLQ16602 461 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 SPRED2Q7Z698 418 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 DIS3L2Q8IYB7 885 aaKnown RBP8.2□□□□□ -1.1
SCFD1-222ENST00000556768 CMTR2Q8IYT2 770 aaKnown RBP8.2□□□□□ -1.1
SCFD1-222ENST00000556768 NSUN7Q8NE18 718 aaKnown RBP8.2□□□□□ -1.1
SCFD1-222ENST00000556768 CLP1Q92989 425 aaKnown RBP8.2□□□□□ -1.1
SCFD1-222ENST00000556768 CEP170P1Q96L14 293 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 ZSWIM4Q9H7M6 989 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 KCNMB3Q9NPA1 279 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 GJB4Q9NTQ9 266 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 MYH7BA7E2Y1 1941 aa8.2□□□□□ -1.1
SCFD1-222ENST00000556768 C5orf67F2Z3F1 127 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 SLC37A4O43826 429 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 EDIL3O43854 480 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 NEMFO60524 1076 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 FDPSP14324 419 aaKnown RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 SFPQP23246 707 aaKnown RBP eCLIP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 POLGP54098 1239 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 TFF2Q03403 129 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 NCBP1Q09161 790 aaKnown RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 EPHA7Q15375 998 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 NCAPH2Q6IBW4 605 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 EP400NLQ6ZTU2 488 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 RTN4RL1Q86UN2 441 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 RHPN2Q8IUC4 686 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 ZNF689Q96CS4 500 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 C8orf76Q96K31 380 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 UHRF1Q96T88 793 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 LMAN2LQ9H0V9 348 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 ELAC1Q9H777 363 aaKnown RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 ERVK-5Q9HDB9 667 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 CYP26B1Q9NR63 512 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 TMEM161AQ9NX61 479 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 SUCLA2Q9P2R7 463 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 FAM50BQ9Y247 325 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 BTBD18B2RXH4 712 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 SMAPO00193 183 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 TNFRSF10AO00220 468 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 GAS2O43903 313 aaKnown RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 MAFO75444 373 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 SKIP12755 728 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 DARSP14868 501 aaKnown RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 GPC3P51654 580 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 TARBP2Q15633 366 aaKnown RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 UGCGQ16739 394 aa8.19□□□□□ -1.1
SCFD1-222ENST00000556768 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
SCFD1-222ENST00000556768 B3GNT9Q6UX72 402 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms