RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SV2CQ496J9 727 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 UBXN11Q5T124 520 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 MROH9Q5TGP6 573 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 SLC4A10Q6U841 1118 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 G2E3Q7L622 706 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 FERMT3Q86UX7 667 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 NLRP10Q86W26 655 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 ZNF761Q86XN6 746 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-243ENST00000556671 ZNF34Q8IZ26 560 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 SYNE4Q8N205 404 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 TTLL6Q8N841 843 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 KREMEN2Q8NCW0 462 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 DIO2Q92813 273 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 C11orf84Q9BUA3 381 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-243ENST00000556671 BRIP1Q9BX63 1249 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 LNPKQ9C0E8 428 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 TMX4Q9H1E5 349 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-243ENST00000556671 CNOT11Q9UKZ1 510 aaKnown RBP5.89□□□□□ -1.47
ATXN3-243ENST00000556671 JAG2Q9Y219 1238 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 DUSP10Q9Y6W6 482 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 X6R8D5 127 aa5.89□□□□□ -1.47
ATXN3-243ENST00000556671 KIAA1551Q9HCM1 1747 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 POLR2AP24928 1970 aaKnown RBP5.88□□□□□ -1.47
ATXN3-243ENST00000556671 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 MEFVO15553 781 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-243ENST00000556671 CPP00450 1065 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 SNRPB2P08579 225 aaKnown RBP5.88□□□□□ -1.47
ATXN3-243ENST00000556671 ADRB1P08588 477 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 ETFBP38117 255 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 GJA9P57773 515 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 SLFN5Q08AF3 891 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 SPATS1Q496A3 300 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 PARP10Q53GL7 1025 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 ACBD5Q5T8D3 534 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-243ENST00000556671 MRM1Q6IN84 353 aaKnown RBP5.88□□□□□ -1.47
ATXN3-243ENST00000556671 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 DBX2Q6ZNG2 339 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 CEP68Q76N32 757 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 KYQ8NBH2 561 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 FAM89AQ96GI7 184 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 RBM17Q96I25 401 aaKnown RBP5.88□□□□□ -1.47
ATXN3-243ENST00000556671 SYT3Q9BQG1 590 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 LRP2BPQ9P2M1 347 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 PALD1Q9ULE6 856 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 COL11A2P13942 1736 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-243ENST00000556671 DDX60Q8IY21 1712 aaKnown RBP5.88□□□□□ -1.47
ATXN3-243ENST00000556671 FER1L6Q2WGJ9 1857 aa5.88□□□□□ -1.47
ATXN3-243ENST00000556671 DDAH1O94760 285 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 CAPNS1P04632 268 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 NPR1P16066 1061 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 KCNA3P22001 575 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 RPL13P26373 211 aaKnown RBP5.87□□□□□ -1.47
ATXN3-243ENST00000556671 ALDH1B1P30837 517 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 THBS2P35442 1172 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 BCL6P41182 706 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 ECI1P42126 302 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 GFRA1P56159 465 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 SF1Q15637 639 aaKnown RBP5.87□□□□□ -1.47
ATXN3-243ENST00000556671 FXNQ16595 210 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 CD300LDQ6UXZ3 194 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 DDX46Q7L014 1031 aaKnown RBP5.87□□□□□ -1.47
ATXN3-243ENST00000556671 MILR1Q7Z6M3 343 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 FAM126BQ8IXS8 530 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 MICAL1Q8TDZ2 1067 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 ADAMTS17Q8TE56 1095 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 TRMT2BQ96GJ1 504 aaKnown RBP5.87□□□□□ -1.47
ATXN3-243ENST00000556671 MASTLQ96GX5 879 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 CCDC140Q96MF4 163 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 CWC25Q9NXE8 425 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-243ENST00000556671 FBXL7Q9UJT9 491 aa5.87□□□□□ -1.47
ATXN3-243ENST00000556671 PXDNLA1KZ92 1463 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 UBN2Q6ZU65 1347 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 SH3TC1Q8TE82 1336 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 MYO1BO43795 1136 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 FGRP09769 529 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 SRGNP10124 158 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 CNR2P34972 360 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 ITGA1P56199 1179 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 PRSS53Q2L4Q9 553 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 STYK1Q6J9G0 422 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 ZC3H18Q86VM9 953 aaKnown RBP5.86□□□□□ -1.47
ATXN3-243ENST00000556671 PPIL6Q8IXY8 311 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 RCBTB1Q8NDN9 531 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 DDX1Q92499 740 aaKnown RBP5.86□□□□□ -1.47
ATXN3-243ENST00000556671 FRAT1Q92837 279 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-243ENST00000556671 C1orf159Q96HA4 380 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 TMEM169Q96HH4 297 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.86□□□□□ -1.47
ATXN3-243ENST00000556671 SMC4Q9NTJ3 1288 aa5.86□□□□□ -1.47
ATXN3-243ENST00000556671 C9orf78Q9NZ63 289 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-243ENST00000556671 TNRC6CQ9HCJ0 1690 aaKnown RBP5.85□□□□□ -1.47
ATXN3-243ENST00000556671 C10orf71Q711Q0 1435 aa5.85□□□□□ -1.47
ATXN3-243ENST00000556671 H7BY64 318 aa5.85□□□□□ -1.47
ATXN3-243ENST00000556671 NTSR2O95665 410 aa5.85□□□□□ -1.47
ATXN3-243ENST00000556671 GNL2Q13823 731 aaKnown RBP5.85□□□□□ -1.47
ATXN3-243ENST00000556671 PRR31Q5SQ13 230 aa5.85□□□□□ -1.47
ATXN3-243ENST00000556671 DENND5AQ6IQ26 1287 aa5.85□□□□□ -1.47
ATXN3-243ENST00000556671 OLFM4Q6UX06 510 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms