RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 DZIP1LQ8IYY4 767 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 SVOPQ8N4V2 548 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 OR52K2Q8NGK3 314 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 NEDD1Q8NHV4 660 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 MAIP1Q8WWC4 291 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 IPCEF1Q8WWN9 437 aaPredicted RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 GFM2Q969S9 779 aaKnown RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 APOL5Q9BWW9 433 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 STMN4Q9H169 189 aaPredicted RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 PSTPIP2Q9H939 334 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 KCNQ5Q9NR82 932 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 SUCLA2Q9P2R7 463 aaPredicted RBP6.73□□□□□ -1.33
TDP1-215ENST00000556498 MBD2Q9UBB5 411 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 RASAL2Q9UJF2 1139 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 KIF27Q86VH2 1401 aa6.73□□□□□ -1.33
TDP1-215ENST00000556498 H3BRJ5 948 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 SOX1O00570 391 aaPredicted RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 STRNO43815 780 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 USO1O60763 962 aaKnown RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 FBXO24O75426 580 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 NPTXRO95502 500 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 APBB3O95704 486 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 MBD3O95983 291 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 B3GALT4O96024 378 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 KRT14P02533 472 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 CAPNS1P04632 268 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 GNAT1P11488 350 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 ALAS1P13196 640 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 ALDH3A1P30838 453 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 PPM1FP49593 454 aaPredicted RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 RCAN1P53805 252 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 CABP4P57796 275 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 NIPAL4Q0D2K0 466 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 FAPQ12884 760 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 IKBKEQ14164 716 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 PSMD6Q15008 389 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 NONOQ15233 471 aaKnown RBP eCLIP6.72□□□□□ -1.33
TDP1-215ENST00000556498 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 SHROOM1Q2M3G4 852 aaPredicted RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 MTERF2Q49AM1 385 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 CRTC1Q6UUV9 634 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 RTL10Q7L3V2 364 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 ZNF554Q86TJ5 538 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 MCF2L2Q86YR7 1114 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 WFDC8Q8IUA0 241 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 ARHGAP18Q8N392 663 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 NSUN7Q8NE18 718 aaKnown RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 KAT2BQ92831 832 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 E2F7Q96AV8 911 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 CEP19Q96LK0 163 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 CATSPER2Q96P56 530 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 NECAB3Q96P71 396 aaPredicted RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 TSGA13Q96PP4 275 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 PRPF18Q99633 342 aaKnown RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 TSG101Q99816 390 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 FAM129AQ9BZQ8 928 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 API5Q9BZZ5 524 aaKnown RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 SIL1Q9H173 461 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 CCSER2Q9H7U1 834 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 DMAP1Q9NPF5 467 aaPredicted RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 STARD7Q9NQZ5 370 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 KLC4Q9NSK0 619 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 TMEM39AQ9NV64 488 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 ATAD3AQ9NVI7 634 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 TBCCD1Q9NVR7 557 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 NDUFA13Q9P0J0 144 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 GGA2Q9UJY4 613 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 DUSP12Q9UNI6 340 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 LIMCH1Q9UPQ0 1083 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 EFR3BQ9Y2G0 817 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 MRPL42Q9Y6G3 142 aaKnown RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 EPN1Q9Y6I3 576 aaPredicted RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 SLC4A7Q9Y6M7 1214 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.72□□□□□ -1.33
TDP1-215ENST00000556498 SYNJ1O43426 1573 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 MRC2Q9UBG0 1479 aa6.72□□□□□ -1.33
TDP1-215ENST00000556498 DNMBPQ6XZF7 1577 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.71□□□□□ -1.34
TDP1-215ENST00000556498 TRIM43BA6NCK2 446 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 LRRC72A6NJI9 287 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 LACTBL1A8MY62 500 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 RSPH10B2B2RC85 870 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 LINC01387J3KSC0 135 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 ENPP3O14638 875 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 ENC1O14682 589 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 MGRN1O60291 552 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 GFPT2O94808 682 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 FBXO21O94952 628 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 ECDO95905 644 aaPredicted RBP6.71□□□□□ -1.34
TDP1-215ENST00000556498 SERPINC1P01008 464 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 RSPH10BP0C881 870 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 SLC5A1P13866 664 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.34
TDP1-215ENST00000556498 IL32P24001 234 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 KRT9P35527 623 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 HAAOP46952 286 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 GNAQP50148 359 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 LIMK1P53667 647 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms