RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 PCDHA3Q9Y5H8 950 aa9.25□□□□□ -0.93
MARK3-210ENST00000556463 GNA14O95837 355 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 ITGA4P13612 1032 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 DSG3P32926 999 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 SERPINB4P48594 390 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 VPS41P49754 854 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 JAM2P57087 298 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 ASRGL1Q7L266 308 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 NANOGNBQ7Z5D8 188 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 NT5DC3Q86UY8 548 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 MFN1Q8IWA4 741 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 CCDC197Q8NCU1 140 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 PNMA1Q8ND90 353 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 LARP4BQ92615 738 aaKnown RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 LZTS2Q9BRK4 669 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 CNOT7Q9UIV1 285 aaKnown RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 NAGPAQ9UK23 515 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 AGAP1Q9UPQ3 857 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 XIRP1Q702N8 1843 aaKnown RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 IRS2Q9Y4H2 1338 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 KCNK3O14649 394 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 DAPK3O43293 454 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 CTNND1O60716 968 aaKnown RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 RNF8O76064 485 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 LUC7L3O95232 432 aaKnown RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 NTSR2O95665 410 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 FUT4P22083 530 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 TECP42680 631 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 PTK2Q05397 1052 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 CACNA2D4Q7Z3S7 1137 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 NEK8Q86SG6 692 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 ERICH1Q86X53 443 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 MOV10L1Q9BXT6 1211 aaKnown RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 VCXQ9H320 206 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 SLC5A4Q9NY91 659 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 ADAMTS1Q9UHI8 967 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 ARFGEF1Q9Y6D6 1849 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 NAV1Q8NEY1 1877 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 A8MUI8 341 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 AHCYL1O43865 530 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 RARAP10276 462 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 CYP2D6P10635 497 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 POLR2FP61218 127 aaKnown RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 NONOQ15233 471 aaKnown RBP eCLIP9.24□□□□□ -0.93
MARK3-210ENST00000556463 KRT71Q3SY84 523 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 EAPPQ56P03 285 aaPredicted RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 ZDHHC24Q6UX98 284 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 KCNK18Q7Z418 384 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 SLC30A5Q8TAD4 765 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 DYDC2Q96IM9 177 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 FAM84BQ96KN1 310 aaPredicted RBP9.24□□□□□ -0.93
MARK3-210ENST00000556463 ZNF570Q96NI8 536 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 SYT11Q9BT88 431 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 TAF1P21675 1872 aa9.24□□□□□ -0.93
MARK3-210ENST00000556463 DDX3YO15523 660 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 SMNDC1O75940 238 aaKnown RBP eCLIP9.23□□□□□ -0.936e-6■□□□□ 8.8
MARK3-210ENST00000556463 ETS2P15036 469 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 PTENP60484 403 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 ECM1Q16610 540 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 P3H1Q32P28 736 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 CCDC152Q4G0S7 254 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 C12orf60Q5U649 245 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 MDM1Q8TC05 714 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 MAIP1Q8WWC4 291 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 DDX12PQ92771 950 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 SPATA17Q96L03 361 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 PLEKHG4BQ96PX9 1271 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 LSM14BQ9BX40 385 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 MTFR1LQ9H019 292 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 PABPC3Q9H361 631 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 PREBQ9HCU5 417 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 NLRC4Q9NPP4 1024 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 SLC4A7Q9Y6M7 1214 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 A6NHS1 94 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 WTIPA6NIX2 430 aaPredicted RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 LSM1O15116 133 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 CCNT1O60563 726 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 RAD23BP54727 409 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 LMNB2Q03252 620 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 PPATQ06203 517 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 DCAF12L1Q5VU92 463 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 DZIP3Q86Y13 1208 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 RBM46Q8TBY0 533 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 CALML4Q96GE6 196 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 DDX47Q9H0S4 455 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 ARHGEF3Q9NR81 526 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 AMACRQ9UHK6 382 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 TMA7Q9Y2S6 64 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 WNK3Q9BYP7 1800 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 NCANO14594 1321 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 CHN1P15882 459 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 NCALDP61601 193 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 PRPF4BQ13523 1007 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 TDRD12Q587J7 1177 aaKnown RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 NCAPG2Q86XI2 1143 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 COL23A1Q86Y22 540 aaPredicted RBP9.23□□□□□ -0.93
MARK3-210ENST00000556463 RPS6KC1Q96S38 1066 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 NUDT12Q9BQG2 462 aa9.23□□□□□ -0.93
MARK3-210ENST00000556463 SIX2Q9NPC8 291 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms