RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 DLL1O00548 723 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ZSCAN20P17040 1043 aaPredicted RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 GLRA2P23416 452 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 DNAJB1P25685 340 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ARL2P36404 184 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 FXR2P51116 673 aaKnown RBP eCLIP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ORC2Q13416 577 aaPredicted RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 CAMK1Q14012 370 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 LONRF3Q496Y0 759 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 CLLU1OSQ5K130 101 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ODR4Q5SWX8 454 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 LRRC55Q6ZSA7 311 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 MAEAQ7L5Y9 396 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ZNF598Q86UK7 904 aaKnown RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 FERMT3Q86UX7 667 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ZNF410Q86VK4 478 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ZNF710Q8N1W2 664 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 RNF169Q8NCN4 708 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 PSPC1Q8WXF1 523 aaKnown RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 MRPL38Q96DV4 380 aaKnown RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 CASD1Q96PB1 797 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 MTRQ99707 1265 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 JPH2Q9BR39 696 aaPredicted RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 POLR3CQ9BUI4 534 aaPredicted RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 CWH43Q9H720 699 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ATP6V0A4Q9HBG4 840 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 POLD4Q9HCU8 107 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 TUFT1Q9NNX1 390 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 ALG13Q9NP73 1137 aaKnown RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 GPRC5CQ9NQ84 441 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 TYW1Q9NV66 732 aaKnown RBP9.04□□□□□ -0.96
VTI1B-206ENST00000556461 TMEM161AQ9NX61 479 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 LMCD1Q9NZU5 365 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 THEGQ9P2T0 379 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 PPME1Q9Y570 386 aa9.04□□□□□ -0.96
VTI1B-206ENST00000556461 A0A0U1RQF3 1178 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 H3BQV1 296 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 USO1O60763 962 aaKnown RBP9.03□□□□□ -0.96
VTI1B-206ENST00000556461 ITGB1P05556 798 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 RB1P06400 928 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 KCNA4P22459 653 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 RPA1P27694 616 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 CDC25AP30304 524 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 HOXA11P31270 313 aaPredicted RBP9.03□□□□□ -0.96
VTI1B-206ENST00000556461 PBX3P40426 434 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 CDC42EP1Q00587 391 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 CAPSQ13938 189 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 UBXN11Q5T124 520 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 LARP1BQ659C4 914 aaKnown RBP9.03□□□□□ -0.96
VTI1B-206ENST00000556461 CATSPER4Q7RTX7 472 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 KLHL23Q8NBE8 558 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 RNF149Q8NC42 400 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 IL27Q8NEV9 243 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 TCP11Q8WWU5 503 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 LPPQ93052 612 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 MMTAG2Q9BU76 263 aaKnown RBP9.03□□□□□ -0.96
VTI1B-206ENST00000556461 POLR3FQ9H1D9 316 aaPredicted RBP9.03□□□□□ -0.96
VTI1B-206ENST00000556461 ELAC1Q9H777 363 aaKnown RBP9.03□□□□□ -0.96
VTI1B-206ENST00000556461 FOXD4L1Q9NU39 408 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 LRWD1Q9UFC0 647 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 PLAGL2Q9UPG8 496 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 PIN4Q9Y237 131 aaKnown RBP9.03□□□□□ -0.96
VTI1B-206ENST00000556461 KIF3AQ9Y496 699 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.03□□□□□ -0.96
VTI1B-206ENST00000556461 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 NCOR1O75376 2440 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 ARID2Q68CP9 1835 aa9.03□□□□□ -0.96
VTI1B-206ENST00000556461 GAS2O43903 313 aaKnown RBP9.02□□□□□ -0.97
VTI1B-206ENST00000556461 DGAT1O75907 488 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 XRCC6P12956 609 aaKnown RBP eCLIP9.02□□□□□ -0.97
VTI1B-206ENST00000556461 SFPQP23246 707 aaKnown RBP eCLIP9.02□□□□□ -0.97
VTI1B-206ENST00000556461 IRS1P35568 1242 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 CCT6AP40227 531 aaKnown RBP9.02□□□□□ -0.97
VTI1B-206ENST00000556461 PHKA2P46019 1235 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 KCNQ1P51787 676 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 PTENP60484 403 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 AMHR2Q16671 573 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 TCEAL5Q5H9L2 206 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 TJAP1Q5JTD0 557 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 TWF2Q6IBS0 349 aaKnown RBP9.02□□□□□ -0.97
VTI1B-206ENST00000556461 PADI6Q6TGC4 694 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 KCNK18Q7Z418 384 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 SRGAP1Q7Z6B7 1085 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 EXOC8Q8IYI6 725 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 IGSF22Q8N9C0 903 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 SPPL3Q8TCT6 385 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 HELQQ8TDG4 1101 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 BSNDQ8WZ55 320 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 ASB2Q96Q27 587 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 NACC1Q96RE7 527 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 C11orf84Q9BUA3 381 aaPredicted RBP9.02□□□□□ -0.97
VTI1B-206ENST00000556461 PLVAPQ9BX97 442 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 TMEM117Q9H0C3 514 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 CHST12Q9NRB3 414 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 AGPAT5Q9NUQ2 364 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 FAM105AQ9NUU6 356 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 DBR1Q9UK59 544 aaKnown RBP9.02□□□□□ -0.97
VTI1B-206ENST00000556461 KIAA1671Q9BY89 1806 aa9.02□□□□□ -0.97
VTI1B-206ENST00000556461 FNDC1Q4ZHG4 1894 aaPredicted RBP9.02□□□□□ -0.97
VTI1B-206ENST00000556461 NLRC5Q86WI3 1866 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms