RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 VN1R3Q9BXE9 311 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SLC26A6Q9BXS9 759 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 POMKQ9H5K3 350 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SAMM50Q9Y512 469 aa16.2■□□□□ 0.18
CHMP4BP1-201ENST00000556017 CHMP2AO43633 222 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 CLASP2O75122 1294 aaKnown RBP16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 EOMESO95936 686 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ZSCAN20P17040 1043 aaPredicted RBP16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 HOXB8P17481 243 aaPredicted RBP16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SP100P23497 879 aaPredicted RBP16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TMOD1P28289 359 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 PPM1AP35813 382 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 BCAR1P56945 870 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 Q4G0T1 1027 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 LRCH2Q5VUJ6 765 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 KANK3Q6NY19 840 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TMC7Q7Z402 723 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ZNF710Q8N1W2 664 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 RNF169Q8NCN4 708 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ETNPPLQ8TBG4 499 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 BICD2Q8TD16 824 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SMOC2Q9H3U7 446 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 NRBP2Q9NSY0 501 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 PUF60Q9UHX1 559 aaKnown RBP16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ARID2Q68CP9 1835 aa16.19■□□□□ 0.18
CHMP4BP1-201ENST00000556017 A0A087WZ62 844 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 C2CD4DB7Z1M9 353 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 GAS7O60861 476 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 AVPR2P30518 371 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SFNP31947 248 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 PHKA2P46019 1235 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 JAK3P52333 1124 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 FGD1P98174 961 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ANO5Q75V66 913 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 KSR1Q8IVT5 923 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 AUTS2Q8WXX7 1259 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 LPPQ93052 612 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 AIFM3Q96NN9 605 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 FDXACB1Q9BRP7 624 aaPredicted RBP16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ZBP1Q9H171 429 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ADAM7Q9H2U9 754 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SH3GLB2Q9NR46 395 aa16.18■□□□□ 0.18
CHMP4BP1-201ENST00000556017 BRD1O95696 1058 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 PTPN5P54829 565 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SMC1AQ14683 1233 aaKnown RBP16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 MTERF2Q49AM1 385 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 XKR3Q5GH77 459 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ZNF579Q8NAF0 562 aaKnown RBP16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 CCDC148Q8NFR7 591 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 RDM1Q8NG50 284 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 NRDE2Q9H7Z3 1164 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 IRAK3Q9Y616 596 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 WDR87Q6ZQQ6 2873 aa16.17■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SPTBN4Q9H254 2564 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 EML1O00423 815 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 MAFO75444 373 aaPredicted RBP16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 WEE2P0C1S8 567 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 AFF1P51825 1210 aaKnown RBP16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 KRT17Q04695 432 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 LONRF3Q496Y0 759 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 MIER3Q7Z3K6 550 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SUGP1Q8IWZ8 645 aaKnown RBP16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ABI1Q8IZP0 508 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 C12orf76Q8N812 135 aaPredicted RBP16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 DAGLBQ8NCG7 672 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SLC22A17Q8WUG5 538 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 NLRP7Q8WX94 980 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 CASP10Q92851 521 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 IFT122Q9HBG6 1241 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 CHST12Q9NRB3 414 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TBC1D13Q9NVG8 400 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 FAM86C1Q9NVL1 165 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 WRAP73Q9P2S5 460 aaPredicted RBP16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 DNAJB4Q9UDY4 337 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SEPT9Q9UHD8 586 aaPredicted RBP16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 TCEAL9Q9UHQ7 104 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 PCDHA4Q9UN74 947 aa16.16■□□□□ 0.18
CHMP4BP1-201ENST00000556017 SLC37A4O43826 429 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ZNF623O75123 536 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 OFD1O75665 1012 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 GALTP07902 379 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 EPCAMP16422 314 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ZNF280BQ86YH2 543 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 VPS52Q8N1B4 723 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 KREMEN2Q8NCW0 462 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 IGSF21Q96ID5 467 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 RIPOR3Q96MK2 946 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 MRPL9Q9BYD2 267 aaKnown RBP16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 GCOM2Q9BZD3 368 aaPredicted RBP16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 DACT1Q9NYF0 836 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 VAV3Q9UKW4 847 aa16.15■□□□□ 0.18
CHMP4BP1-201ENST00000556017 ZC3H11AO75152 810 aaKnown RBP eCLIP16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 CXCL14O95715 111 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SRGAP2BP0DMP2 458 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 CTSAP10619 480 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 NLRP5P59047 1200 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms