RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 NUDT12Q9BQG2 462 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 FAM167BQ9BTA0 163 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 ERVK-5Q9HDB9 667 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 PRDM11Q9NQV5 511 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 PAPOLBQ9NRJ5 636 aaKnown RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 BIN2Q9UBW5 565 aaPredicted RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 GGT7Q9UJ14 662 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 PPP1R9AQ9ULJ8 1098 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 RPL26L1Q9UNX3 145 aaKnown RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 COL5A2P05997 1499 aaPredicted RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 KIF13BQ9NQT8 1826 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 PITPNM2Q9BZ72 1349 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 ALAS1P13196 640 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 VCAM1P19320 739 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 SSR1P43307 286 aaKnown RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 SLCO1A2P46721 670 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 GCLCP48506 637 aaPredicted RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 RPS6KA3P51812 740 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 THEMIS2Q5TEJ8 643 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 ANO7Q6IWH7 933 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 ZNF444Q8N0Y2 327 aaPredicted RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 ARHGEF2Q92974 986 aaKnown RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 FAM84BQ96KN1 310 aaPredicted RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 TMEM237Q96Q45 408 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 FGFBP2Q9BYJ0 223 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 LRMDAQ9H2I8 198 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHD8-209ENST00000555935 BCL9O00512 1426 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 USP17L3A6NCW0 530 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 USP17L4A6NCW7 530 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 MPHOSPH10O00566 681 aaKnown RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 SLC16A3O15427 465 aaKnown RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 TDP2O95551 362 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 EYA4O95677 639 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 USP17L8P0C7I0 530 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 GOLGA8HP0CJ92 632 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 FGFR4P22455 802 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 CTNNA2P26232 953 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 ADCY7P51828 1080 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 HADHBP55084 474 aaKnown RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 MXRA7P84157 204 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 TSNAXIP1Q2TAA8 658 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 USP17L1Q7RTZ2 530 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 FBXO33Q7Z6M2 555 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 DNAAF5Q86Y56 855 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 GALNT15Q8N3T1 639 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 ENDOVQ8N8Q3 282 aaKnown RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 PIGOQ8TEQ8 1089 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 STK32AQ8WU08 396 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 INPP5DQ92835 1189 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 DDX17Q92841 729 aaKnown RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 ART4Q93070 314 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 ZNF287Q9HBT7 754 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 ETNK1Q9HBU6 452 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 SIX2Q9NPC8 291 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 OSGEPQ9NPF4 335 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 TMEM260Q9NX78 707 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 CYP39A1Q9NYL5 469 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 TBC1D7Q9P0N9 293 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 DBR1Q9UK59 544 aaKnown RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 STX8Q9UNK0 236 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 DCCP43146 1447 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 SCN7AQ01118 1682 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 C10orf71Q711Q0 1435 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 GPR75-ASB3A0A0A6YYF3 556 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 DPPA5A6NC42 116 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 CALUO43852 315 aaPredicted RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 SMIM24O75264 130 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 AP1G2O75843 785 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 BAG3O95817 575 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 TTLL1O95922 423 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 PLA2G4BP0C869 781 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 ACADSP16219 412 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 PCK1P35558 622 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 SETDB1Q15047 1291 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 LRRC14Q15048 493 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 MTFR1Q15390 333 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 ZNF568Q3ZCX4 644 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 C11orf63Q6NUN7 778 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 VSTM1Q6UX27 236 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 GPBP1Q86WP2 473 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHD8-209ENST00000555935 UBL4BQ8N7F7 174 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 LNX1Q8TBB1 728 aaPredicted RBP8.38□□□□□ -1.07
CHD8-209ENST00000555935 C18orf8Q96DM3 657 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 MAGEB18Q96M61 343 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 ARHGEF10LQ9HCE6 1279 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 ASB3Q9Y575 518 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 PCDHA3Q9Y5H8 950 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 PASKQ96RG2 1323 aa8.38□□□□□ -1.07
CHD8-209ENST00000555935 PDXKO00764 312 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 PEX11AO75192 247 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 RTN3O95197 1032 aaPredicted RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 TPBGLP0DKB5 382 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 RPL13P26373 211 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 SOX5P35711 763 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 KLC1Q07866 573 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 ECM1Q16610 540 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms