RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 GTF2F1P35269 517 aaKnown RBP eCLIP14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 NDUFV1P49821 464 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 DRP2Q13474 957 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 LRRC55Q6ZSA7 311 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 ADGRD2Q7Z7M1 963 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 C4orf19Q8IY42 314 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 THNSL1Q8IYQ7 743 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 SLC7A3Q8WY07 619 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 MRPS27Q92552 414 aaKnown RBP14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 HAS1Q92839 578 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 GTF3C6Q969F1 213 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 IGFLR1Q9H665 355 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 BRMS1Q9HCU9 246 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 CYP26B1Q9NR63 512 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 CLEC1BQ9P126 229 aa14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 SUCLA2Q9P2R7 463 aaPredicted RBP14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 ORC3Q9UBD5 711 aaPredicted RBP14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 PUF60Q9UHX1 559 aaKnown RBP14.24□□□□□ -0.13
HNRNPC-221ENST00000555883 A0A087WZ62 844 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 DDX11L8A8MPP1 907 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 PRR33A8MZF0 331 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 LINC01565O15544 149 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 DCXO43602 365 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 FDPSP14324 419 aaKnown RBP14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 ATF7P17544 494 aaPredicted RBP14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 RFC5P40937 340 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 NRIP1P48552 1158 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 RAB27AP51159 221 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 KRT17Q04695 432 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 SPIRE1Q08AE8 756 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 EPHA7Q15375 998 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 CLLU1OSQ5K130 101 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 KCNT2Q6UVM3 1135 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 TMEM184AQ6ZMB5 413 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 PIK3AP1Q6ZUJ8 805 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 OXER1Q8TDS5 423 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 TNFRSF25Q93038 417 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 ZNF558Q96NG5 402 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 FDXACB1Q9BRP7 624 aaPredicted RBP14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 DHX33Q9H6R0 707 aaKnown RBP14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 TLE6Q9H808 572 aa14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 NGRNQ9NPE2 291 aaKnown RBP14.23□□□□□ -0.13
HNRNPC-221ENST00000555883 TMEM150BA6NC51 233 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 ZNF623O75123 536 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 BAG4O95429 457 aaKnown RBP14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 GLP2RO95838 553 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 KRT2P35908 639 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 PHKA2P46019 1235 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 ERVFC1P60507 584 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 KCNC3Q14003 757 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 PCBP1Q15365 356 aaKnown RBP eCLIP14.22□□□□□ -0.133e-6■■■□□ 15.1
HNRNPC-221ENST00000555883 ME3Q16798 604 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 DUSP6Q16828 381 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 OTUD6AQ7L8S5 288 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 RHPN2Q8IUC4 686 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 MICAL1Q8TDZ2 1067 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 ZSWIM4Q9H7M6 989 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 IFT122Q9HBG6 1241 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 SPG21Q9NZD8 308 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 HCSTQ9UBK5 93 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 HCN4Q9Y3Q4 1203 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 PLXNA4Q9HCM2 1894 aa14.22□□□□□ -0.13
HNRNPC-221ENST00000555883 LYPLA2O95372 231 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 SRGAP2BP0DMP2 458 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 IBSPP21815 317 aaPredicted RBP14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 YWHABP31946 246 aaKnown RBP14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 PLA2G4FQ68DD2 849 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 SRGAP1Q7Z6B7 1085 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 TCP11Q8WWU5 503 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 PSPC1Q8WXF1 523 aaKnown RBP14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 ZNF668Q96K58 619 aaPredicted RBP14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 CEP170P1Q96L14 293 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 LXNQ9BS40 222 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 GJB4Q9NTQ9 266 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 AGPAT5Q9NUQ2 364 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 WRAP73Q9P2S5 460 aaPredicted RBP14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 COL4A3BPQ9Y5P4 624 aa14.21□□□□□ -0.13
HNRNPC-221ENST00000555883 MYO7AQ13402 2215 aa14.21□□□□□ -0.14
HNRNPC-221ENST00000555883 ASAP2O43150 1006 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 CSPG5O95196 566 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 FGFR4P22455 802 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 PLA2G5P39877 138 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 POLGP54098 1239 aaPredicted RBP14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 NR5A1Q13285 461 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 CLUL1Q15846 466 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 HERC4Q5GLZ8 1057 aaPredicted RBP14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 EARS2Q5JPH6 523 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 TWF2Q6IBS0 349 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 RBM23Q86U06 439 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 SLC39A11Q8N1S5 342 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 NSUN7Q8NE18 718 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 NLRP4Q96MN2 994 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 TCF25Q9BQ70 676 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 SH2D3AQ9BRG2 576 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 FAM105AQ9NUU6 356 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 STK39Q9UEW8 545 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 PIN4Q9Y237 131 aaKnown RBP14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 PCDHGC5Q9Y5F6 944 aa14.2□□□□□ -0.14
HNRNPC-221ENST00000555883 LOC730098B7Z3J9 87 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 MARCH6O60337 910 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms