RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RSPH10B2B2RC85 870 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 M0QZ92 97 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 PQBP1O60828 265 aaKnown RBP13.77□□□□□ -0.21
SHMT2-221ENST00000555773 RSPH10BP0C881 870 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 NPTX2P47972 431 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 BRCA2P51587 3418 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 PEX3P56589 373 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 EHHADHQ08426 723 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 LRRC26Q2I0M4 334 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 TRIM71Q2Q1W2 868 aaKnown RBP13.77□□□□□ -0.21
SHMT2-221ENST00000555773 KMT5BQ4FZB7 885 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 TRIML1Q8N9V2 468 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 ASAP3Q8TDY4 903 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 NFKBIZQ9BYH8 718 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 INO80BQ9C086 356 aaPredicted RBP13.77□□□□□ -0.21
SHMT2-221ENST00000555773 C2orf40Q9H1Z8 148 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 ST6GALNAC4Q9H4F1 302 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 ATP11BQ9Y2G3 1177 aa13.77□□□□□ -0.21
SHMT2-221ENST00000555773 CCDC169A6NNP5 214 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 GPR32O75388 356 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 VTNP04004 478 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 SRGAP2CP0DJJ0 459 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 THPOP40225 353 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 GPC3P51654 580 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 EFNA5P52803 228 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 CRYBB1P53674 252 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-221ENST00000555773 NLRP11P59045 1033 aaKnown RBP13.76□□□□□ -0.21
SHMT2-221ENST00000555773 MRPS6P82932 125 aaKnown RBP13.76□□□□□ -0.21
SHMT2-221ENST00000555773 FAAP100Q0VG06 881 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 COASYQ13057 564 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 FAM26DQ5JW98 314 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 FAM26FQ5R3K3 315 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 ZNF720Q7Z2F6 126 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 SRGAP1Q7Z6B7 1085 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 SFR1Q86XK3 245 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-221ENST00000555773 FAM178BQ8IXR5 827 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 RNF149Q8NC42 400 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 DHX38Q92620 1227 aaKnown RBP13.76□□□□□ -0.21
SHMT2-221ENST00000555773 HTATIP2Q9BUP3 242 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
SHMT2-221ENST00000555773 GCOM2Q9BZD3 368 aaPredicted RBP13.76□□□□□ -0.21
SHMT2-221ENST00000555773 ADAMTS10Q9H324 1103 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 MRPL44Q9H9J2 332 aaKnown RBP13.76□□□□□ -0.21
SHMT2-221ENST00000555773 KMT5AQ9NQR1 393 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 PCDHB13Q9Y5F0 798 aa13.76□□□□□ -0.21
SHMT2-221ENST00000555773 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 PARNO95453 639 aaKnown RBP13.75□□□□□ -0.21
SHMT2-221ENST00000555773 CLTBP09497 229 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 CKBP12277 381 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 PHKA2P46019 1235 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 NCKAP1LP55160 1127 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 PTENP60484 403 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 ALCAMQ13740 583 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 CAPSQ13938 189 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 PCBP1Q15365 356 aaKnown RBP eCLIP13.75□□□□□ -0.21
SHMT2-221ENST00000555773 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-221ENST00000555773 KSR1Q8IVT5 923 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 ZBTB8OSQ8IWT0 167 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 NLRP7Q8WX94 980 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 BSNDQ8WZ55 320 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 ERCC4Q92889 916 aaPredicted RBP13.75□□□□□ -0.21
SHMT2-221ENST00000555773 WNT8BQ93098 351 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 NLRP4Q96MN2 994 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 TMEM134Q9H6X4 195 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 TMEM39AQ9NV64 488 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 ARHGAP28Q9P2N2 729 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 MAN1B1Q9UKM7 699 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 SQORQ9Y6N5 450 aa13.75□□□□□ -0.21
SHMT2-221ENST00000555773 A0A087WZ62 844 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 K7ERI5 159 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 KIF20AO95235 890 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 CHRNA1P02708 482 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 SELPP16109 830 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 EIF4BP23588 611 aaKnown RBP13.74□□□□□ -0.21
SHMT2-221ENST00000555773 PPP1R2P41236 205 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 GTF2BQ00403 316 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 MORC3Q14149 939 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 KIZQ2M2Z5 673 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 ZNF658Q5TYW1 1059 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-221ENST00000555773 CDCA2Q69YH5 1023 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-221ENST00000555773 SASS6Q6UVJ0 657 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 HAUS6Q7Z4H7 955 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 USP38Q8NB14 1042 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 TMEM161BQ8NDZ6 487 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 HVCN1Q96D96 273 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 SCLT1Q96NL6 688 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
SHMT2-221ENST00000555773 STRA6Q9BX79 667 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 IFT122Q9HBG6 1241 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 TBX21Q9UL17 535 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 FRMPD3Q5JV73 1810 aa13.74□□□□□ -0.21
SHMT2-221ENST00000555773 WDR81Q562E7 1941 aa13.73□□□□□ -0.21
SHMT2-221ENST00000555773 EIF3DO15371 548 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms