RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 CCM2LQ9NUG4 571 aaPredicted RBP4.52□□□□□ -1.69
SRP54-209ENST00000555746 NTMQ9P121 344 aa4.52□□□□□ -1.69
SRP54-209ENST00000555746 EPRSP07814 1512 aaKnown RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 A0A0G2JNJ9 132 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 FFAR3O14843 346 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 CUTAO60888 179 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 H2AFYO75367 372 aaKnown RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 APOL3O95236 402 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 CLEC2LP0C7M8 214 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 MYBL2P10244 700 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 MTHFD2P13995 350 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 POLD1P28340 1107 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 RAP1GAPP47736 663 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 MTNR1BP49286 362 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 TOP3AQ13472 1001 aaPredicted RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 EIF4HQ15056 248 aaKnown RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 DGKDQ16760 1214 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 UGT8Q16880 541 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 ABCB5Q2M3G0 1257 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 WDR72Q3MJ13 1102 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 CCDC62Q6P9F0 684 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 TRMT10BQ6PF06 316 aaKnown RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 TMEM151BQ8IW70 566 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 CDYL2Q8N8U2 506 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 LINC01356Q8N9X3 169 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 OR5AN1Q8NGI8 311 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 ZNF526Q8TF50 670 aaPredicted RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 EAF2Q96CJ1 260 aaPredicted RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 YTHDC1Q96MU7 727 aaKnown RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 SMAD5Q99717 465 aaKnown RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 KATNBL1Q9H079 304 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 ZNF277Q9NRM2 450 aaPredicted RBP4.51□□□□□ -1.69
SRP54-209ENST00000555746 KLHL42Q9P2K6 505 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 FTSJ1Q9UET6 329 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 Q9UFV3 132 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 PRSS50Q9UI38 385 aa4.51□□□□□ -1.69
SRP54-209ENST00000555746 ARID4BQ4LE39 1312 aaPredicted RBP4.5□□□□□ -1.69
SRP54-209ENST00000555746 E2F8A0AVK6 867 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 C9orf118A6NHY6 69 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 NPIPB6E9PJ23 425 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 MT-CO1P00395 513 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 ETV4P43268 484 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 SARSP49591 514 aaKnown RBP4.5□□□□□ -1.69
SRP54-209ENST00000555746 AFF3P51826 1226 aaKnown RBP4.5□□□□□ -1.69
SRP54-209ENST00000555746 TRIM25Q14258 630 aaKnown RBP4.5□□□□□ -1.69
SRP54-209ENST00000555746 PTPN21Q16825 1174 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.5□□□□□ -1.69
SRP54-209ENST00000555746 FAM26FQ5R3K3 315 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 TMEM240Q5SV17 173 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 ZBTB46Q86UZ6 589 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 REXO1L1PQ8IX06 675 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 CARFQ8N187 725 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 TP53I13Q8NBR0 393 aaPredicted RBP4.5□□□□□ -1.69
SRP54-209ENST00000555746 PPP1R14CQ8TAE6 165 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 TGFBRAP1Q8WUH2 860 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 AJUBAQ96IF1 538 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 CAMKK2Q96RR4 588 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 KCTD10Q9H3F6 313 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 PRDM12Q9H4Q4 367 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 TCF7L1Q9HCS4 588 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 PCDHB6Q9Y5E3 794 aa4.5□□□□□ -1.69
SRP54-209ENST00000555746 DDX3XO00571 662 aaKnown RBP eCLIP4.49□□□□□ -1.692e-11■■■□□ 16.3
SRP54-209ENST00000555746 PCDHGA12O60330 932 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 SEC24DO94855 1032 aaPredicted RBP4.49□□□□□ -1.69
SRP54-209ENST00000555746 ABLIM3O94929 683 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 PCDH8O95206 1070 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 LPLP06858 475 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 CELA3BP08861 270 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 AGXTP21549 392 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 YY1P25490 414 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 TXKP42681 527 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 ANTXR2P58335 489 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 PCBP2Q15366 365 aaKnown RBP eCLIP4.49□□□□□ -1.69
SRP54-209ENST00000555746 PKN1Q16512 942 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 NFE2Q16621 373 aaPredicted RBP4.49□□□□□ -1.69
SRP54-209ENST00000555746 MUM1Q2TAK8 710 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 ANO4Q32M45 955 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 TRIM68Q6AZZ1 485 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 PGM2L1Q6PCE3 622 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 Q6ZUG5 572 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 AMOTL1Q8IY63 956 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 NUDT10Q8NFP7 164 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 OR14C36Q8NHC7 312 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 GAB3Q8WWW8 586 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 AUTS2Q8WXX7 1259 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 JDP2Q8WYK2 163 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 NKD2Q969F2 451 aaPredicted RBP4.49□□□□□ -1.69
SRP54-209ENST00000555746 NUDT11Q96G61 164 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 HIST1H2AHQ96KK5 128 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 HIST1H2AJQ99878 128 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 NOL10Q9BSC4 688 aaKnown RBP4.49□□□□□ -1.69
SRP54-209ENST00000555746 OSBPL6Q9BZF3 934 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 L2HGDHQ9H9P8 463 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 POLR3BQ9NW08 1133 aaPredicted RBP4.49□□□□□ -1.69
SRP54-209ENST00000555746 DNAJC28Q9NX36 388 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 MKS1Q9NXB0 559 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 SAE1Q9UBE0 346 aaPredicted RBP4.49□□□□□ -1.69
SRP54-209ENST00000555746 VWA7Q9Y334 891 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 PCDHGA9Q9Y5G4 932 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms