RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CALCRLQ16602 461 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 TMEM31Q5JXX7 168 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 C4orf19Q8IY42 314 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 EFHBQ8N7U6 833 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 TCP11Q8WWU5 503 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 PSPC1Q8WXF1 523 aaKnown RBP17.26■□□□□ 0.35
SNX6-205ENST00000555648 CASD1Q96PB1 797 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 POP1Q99575 1024 aaKnown RBP17.26■□□□□ 0.35
SNX6-205ENST00000555648 ZSWIM4Q9H7M6 989 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 ENTPD7Q9NQZ7 604 aa17.26■□□□□ 0.35
SNX6-205ENST00000555648 LINC01565O15544 149 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 LARGE1O95461 756 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 YWHABP31946 246 aaKnown RBP17.25■□□□□ 0.35
SNX6-205ENST00000555648 LTBRP36941 435 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 CYP4A11Q02928 519 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 ADAM15Q13444 863 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 SMAD4Q13485 552 aaKnown RBP17.25■□□□□ 0.35
SNX6-205ENST00000555648 XKR9Q5GH70 373 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 KCNT2Q6UVM3 1135 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 ADGRD2Q7Z7M1 963 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 TPH2Q8IWU9 490 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 DIS3L2Q8IYB7 885 aaKnown RBP17.25■□□□□ 0.35
SNX6-205ENST00000555648 HAS1Q92839 578 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 DYDC2Q96IM9 177 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 CEP89Q96ST8 783 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 CDCA3Q99618 268 aaPredicted RBP17.25■□□□□ 0.35
SNX6-205ENST00000555648 CWH43Q9H720 699 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 SPG21Q9NZD8 308 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 RGL1Q9NZL6 768 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 HCSTQ9UBK5 93 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 PCDHA12Q9UN75 941 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 LZTS1Q9Y250 596 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 COL4A3BPQ9Y5P4 624 aa17.25■□□□□ 0.35
SNX6-205ENST00000555648 RALGAPA2Q2PPJ7 1873 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 VCANP13611 3396 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 BTBD18B2RXH4 712 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 GAS2O43903 313 aaKnown RBP17.24■□□□□ 0.35
SNX6-205ENST00000555648 NEMFO60524 1076 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 JAK2O60674 1132 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 SRGAP2CP0DJJ0 459 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 ALADP13716 330 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 ALDH7A1P49419 539 aaKnown RBP17.24■□□□□ 0.35
SNX6-205ENST00000555648 RAB27AP51159 221 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
SNX6-205ENST00000555648 CTTNQ14247 550 aaKnown RBP17.24■□□□□ 0.35
SNX6-205ENST00000555648 EARS2Q5JPH6 523 aaKnown RBP17.24■□□□□ 0.35
SNX6-205ENST00000555648 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 ADHFE1Q8IWW8 467 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 HELQQ8TDG4 1101 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 RSPH1Q8WYR4 309 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 MRPS27Q92552 414 aaKnown RBP17.24■□□□□ 0.35
SNX6-205ENST00000555648 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 TCF25Q9BQ70 676 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 CD320Q9NPF0 282 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
SNX6-205ENST00000555648 LIMCH1Q9UPQ0 1083 aa17.24■□□□□ 0.35
SNX6-205ENST00000555648 MYH9P35579 1960 aaKnown RBP17.23■□□□□ 0.35
SNX6-205ENST00000555648 CARNS1A5YM72 827 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 FAM205CA6NFA0 338 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 PER2O15055 1255 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 ASAP2O43150 1006 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 MBTPS2O43462 519 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 TBX10O75333 385 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 CA8P35219 290 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 PHKA2P46019 1235 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 PLCB3Q01970 1234 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 NCBP1Q09161 790 aaKnown RBP17.23■□□□□ 0.35
SNX6-205ENST00000555648 GNL2Q13823 731 aaKnown RBP17.23■□□□□ 0.35
SNX6-205ENST00000555648 SMAD2Q15796 467 aaKnown RBP17.23■□□□□ 0.35
SNX6-205ENST00000555648 PLPP4Q5VZY2 271 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 GLB1LQ6UWU2 654 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 TMC7Q7Z402 723 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 TMEM87AQ8NBN3 555 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 PGBD4Q96DM1 585 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 MTRQ99707 1265 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 NGRNQ9NPE2 291 aaKnown RBP17.23■□□□□ 0.35
SNX6-205ENST00000555648 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
SNX6-205ENST00000555648 PI4K2BG5E9Z4 385 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 ATP2B1P20020 1258 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 TXKP42681 527 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 RNASELQ05823 741 aaKnown RBP17.22■□□□□ 0.35
SNX6-205ENST00000555648 ZP2Q05996 745 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 EMC2Q15006 297 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 CLLU1OSQ5K130 101 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 LRRC55Q6ZSA7 311 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 SRGAP1Q7Z6B7 1085 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 ZNF598Q86UK7 904 aaKnown RBP17.22■□□□□ 0.35
SNX6-205ENST00000555648 PRPF31Q8WWY3 499 aaKnown RBP17.22■□□□□ 0.35
SNX6-205ENST00000555648 TNFRSF25Q93038 417 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 EIF2AK1Q9BQI3 630 aaKnown RBP17.22■□□□□ 0.35
SNX6-205ENST00000555648 DHX33Q9H6R0 707 aaKnown RBP17.22■□□□□ 0.35
SNX6-205ENST00000555648 TTC12Q9H892 705 aaPredicted RBP17.22■□□□□ 0.35
SNX6-205ENST00000555648 FAM105AQ9NUU6 356 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 RNF19AQ9NV58 838 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 WRAP73Q9P2S5 460 aaPredicted RBP17.22■□□□□ 0.35
SNX6-205ENST00000555648 INPP5FQ9Y2H2 1132 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 NLRC5Q86WI3 1866 aa17.22■□□□□ 0.35
SNX6-205ENST00000555648 ERLIN2O94905 339 aa17.21■□□□□ 0.35
SNX6-205ENST00000555648 SEC24BO95487 1268 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms