RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 PUS10Q3MIT2 529 aaKnown RBP15.45■□□□□ 0.06
PCNX4-209ENST00000555569 C8orf34Q49A92 452 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 OTUD6AQ7L8S5 288 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 KSR1Q8IVT5 923 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 ABI1Q8IZP0 508 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 ZNF579Q8NAF0 562 aaKnown RBP15.45■□□□□ 0.06
PCNX4-209ENST00000555569 COLGALT1Q8NBJ5 622 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 PPP2R3CQ969Q6 453 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 NLRP4Q96MN2 994 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 CASD1Q96PB1 797 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 DHX33Q9H6R0 707 aaKnown RBP15.45■□□□□ 0.06
PCNX4-209ENST00000555569 CWH43Q9H720 699 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 ZSWIM4Q9H7M6 989 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 HCSTQ9UBK5 93 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 PCDHA12Q9UN75 941 aa15.45■□□□□ 0.06
PCNX4-209ENST00000555569 GRXCR2A6NFK2 248 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 WNT7AO00755 349 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 EOMESO95936 686 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 IL9P15248 144 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 LAG3P18627 525 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 YWHABP31946 246 aaKnown RBP15.44■□□□□ 0.06
PCNX4-209ENST00000555569 IRS1P35568 1242 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 GUCY1B3Q02153 619 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 UBE3AQ05086 875 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 SAFBQ15424 915 aaKnown RBP eCLIP15.44■□□□□ 0.06
PCNX4-209ENST00000555569 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 CTC1Q2NKJ3 1217 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 ZNF598Q86UK7 904 aaKnown RBP15.44■□□□□ 0.06
PCNX4-209ENST00000555569 TPH2Q8IWU9 490 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 THNSL1Q8IYQ7 743 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 RNF169Q8NCN4 708 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 ZSCAN31Q96LW9 406 aaPredicted RBP15.44■□□□□ 0.06
PCNX4-209ENST00000555569 EIF2AK1Q9BQI3 630 aaKnown RBP15.44■□□□□ 0.06
PCNX4-209ENST00000555569 LLPHQ9BRT6 129 aaKnown RBP15.44■□□□□ 0.06
PCNX4-209ENST00000555569 IGFLR1Q9H665 355 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 CHST12Q9NRB3 414 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 COL4A3BPQ9Y5P4 624 aa15.44■□□□□ 0.06
PCNX4-209ENST00000555569 GAS2O43903 313 aaKnown RBP15.43■□□□□ 0.06
PCNX4-209ENST00000555569 FGF18O76093 207 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 SLITRK3O94933 977 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 ATF7P17544 494 aaPredicted RBP15.43■□□□□ 0.06
PCNX4-209ENST00000555569 GTF2F1P35269 517 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCNX4-209ENST00000555569 LTBRP36941 435 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 TXKP42681 527 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 EMC2Q15006 297 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 XKR9Q5GH70 373 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 CLLU1OSQ5K130 101 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 TWF2Q6IBS0 349 aaKnown RBP15.43■□□□□ 0.06
PCNX4-209ENST00000555569 LRRC55Q6ZSA7 311 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 CATSPER4Q7RTX7 472 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 ADGRD2Q7Z7M1 963 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 LRRC43Q8N309 656 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 TCP11Q8WWU5 503 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 PSPC1Q8WXF1 523 aaKnown RBP15.43■□□□□ 0.06
PCNX4-209ENST00000555569 TMEM143Q96AN5 459 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 C8orf76Q96K31 380 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 KIF2CQ99661 725 aa15.43■□□□□ 0.06
PCNX4-209ENST00000555569 TTC12Q9H892 705 aaPredicted RBP15.43■□□□□ 0.06
PCNX4-209ENST00000555569 SH2B1Q9NRF2 756 aaPredicted RBP15.43■□□□□ 0.06
PCNX4-209ENST00000555569 PIN4Q9Y237 131 aaKnown RBP15.43■□□□□ 0.06
PCNX4-209ENST00000555569 ZBTB39O15060 712 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 ATP2B1P20020 1258 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 HMGN5P82970 282 aaKnown RBP15.42■□□□□ 0.06
PCNX4-209ENST00000555569 SRGAP1Q7Z6B7 1085 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 FAM178BQ8IXR5 827 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 PRPF31Q8WWY3 499 aaKnown RBP15.42■□□□□ 0.06
PCNX4-209ENST00000555569 MTMR9Q96QG7 549 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 HSD17B14Q9BPX1 270 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 TRAIPQ9BWF2 469 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 IFT122Q9HBG6 1241 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 TLR9Q9NR96 1032 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 BMP2KQ9NSY1 1161 aaPredicted RBP15.42■□□□□ 0.06
PCNX4-209ENST00000555569 FAM50BQ9Y247 325 aa15.42■□□□□ 0.06
PCNX4-209ENST00000555569 LINC01565O15544 149 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 ASAP2O43150 1006 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 TBX10O75333 385 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 LYPLA2O95372 231 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 SRGAP2CP0DJJ0 459 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 SKIP12755 728 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 MCM7P33993 719 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 PHKA2P46019 1235 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 DLX2Q07687 328 aaPredicted RBP15.41■□□□□ 0.06
PCNX4-209ENST00000555569 LAMTOR4Q0VGL1 99 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 ADAM15Q13444 863 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 KCNT2Q6UVM3 1135 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 EFHBQ8N7U6 833 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 HELQQ8TDG4 1101 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 MICAL1Q8TDZ2 1067 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 ZNF558Q96NG5 402 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 MTRQ99707 1265 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 TMEM60Q9H2L4 133 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 LZTS1Q9Y250 596 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 PCDHGC5Q9Y5F6 944 aa15.41■□□□□ 0.06
PCNX4-209ENST00000555569 PPM1AP35813 382 aa15.4■□□□□ 0.06
PCNX4-209ENST00000555569 NRIP1P48552 1158 aa15.4■□□□□ 0.06
PCNX4-209ENST00000555569 NDUFV1P49821 464 aa15.4■□□□□ 0.06
PCNX4-209ENST00000555569 RAB27AP51159 221 aa15.4■□□□□ 0.06
PCNX4-209ENST00000555569 PLCB3Q01970 1234 aa15.4■□□□□ 0.06
PCNX4-209ENST00000555569 CLUL1Q15846 466 aa15.4■□□□□ 0.06
PCNX4-209ENST00000555569 PDE12Q6L8Q7 609 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms