RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ZHX1Q9UKY1 873 aaPredicted RBP26.47■■□□□ 1.83
TMEM260-207ENST00000555497 AFG3L2Q9Y4W6 797 aa26.47■■□□□ 1.83
TMEM260-207ENST00000555497 PCDHGC5Q9Y5F6 944 aa26.47■■□□□ 1.83
TMEM260-207ENST00000555497 ERLIN1O75477 346 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 KCNA2P16389 499 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 ALCAMQ13740 583 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 ALKBH5Q6P6C2 394 aaKnown RBP26.46■■□□□ 1.83
TMEM260-207ENST00000555497 NLRX1Q86UT6 975 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 A1CFQ9NQ94 594 aaKnown RBP26.46■■□□□ 1.83
TMEM260-207ENST00000555497 ANKEF1Q9NU02 776 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 CYP39A1Q9NYL5 469 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 GRID2IPA4D2P6 1211 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 F8VZ95 297 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 DDX3XO00571 662 aaKnown RBP eCLIP26.46■■□□□ 1.83
TMEM260-207ENST00000555497 ZNF862O60290 1169 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 MYL7Q01449 175 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 FAM102BQ5T8I3 360 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 ZNF746Q6NUN9 644 aaPredicted RBP26.46■■□□□ 1.83
TMEM260-207ENST00000555497 LMO3Q8TAP4 145 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 NSUN6Q8TEA1 469 aaKnown RBP26.46■■□□□ 1.83
TMEM260-207ENST00000555497 TCEAL9Q9UHQ7 104 aa26.46■■□□□ 1.83
TMEM260-207ENST00000555497 EVI5O60447 810 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 ZMYND10O75800 440 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 TUBBP07437 444 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 STAT1P42224 750 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 GABPB1Q06547 395 aaPredicted RBP26.45■■□□□ 1.82
TMEM260-207ENST00000555497 DRAP1Q14919 205 aaPredicted RBP26.45■■□□□ 1.82
TMEM260-207ENST00000555497 SENP7Q9BQF6 1050 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 STK33Q9BYT3 514 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 ST6GALNAC4Q9H4F1 302 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 PCDHA10Q9Y5I2 948 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 ATP2A1O14983 1001 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 LRRN2O75325 713 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 STBD1O95210 358 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 SOX5P35711 763 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 NCKAP1LP55160 1127 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 C1orf220Q5T0J3 134 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 C10orf76Q5T2E6 689 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 C12orf56Q8IXR9 622 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 SPATA4Q8NEY3 305 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 PLEKHO2Q8TD55 490 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 MS4A14Q96JA4 679 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 TEX13BQ9BXU2 312 aa26.45■■□□□ 1.82
TMEM260-207ENST00000555497 LCTP09848 1927 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 SPDYE16A6NNV3 312 aaPredicted RBP26.44■■□□□ 1.82
TMEM260-207ENST00000555497 BTNL10A8MVZ5 291 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 FERP16591 822 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 SOX10P56693 466 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 SMC1AQ14683 1233 aaKnown RBP26.44■■□□□ 1.82
TMEM260-207ENST00000555497 NOL9Q5SY16 702 aaKnown RBP26.44■■□□□ 1.82
TMEM260-207ENST00000555497 MMGT1Q8N4V1 131 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 TMEM174Q8WUU8 243 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 KIFC3Q9BVG8 833 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 TIPINQ9BVW5 301 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 HSPBP1Q9NZL4 362 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 TMOD4Q9NZQ9 345 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 GABBR1Q9UBS5 961 aa26.44■■□□□ 1.82
TMEM260-207ENST00000555497 PACSIN2Q9UNF0 486 aaPredicted RBP26.44■■□□□ 1.82
TMEM260-207ENST00000555497 TARSL2A2RTX5 802 aaKnown RBP26.43■■□□□ 1.82
TMEM260-207ENST00000555497 PPP3CAQ08209 521 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 MEI1Q5TIA1 1274 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 PHLDB3Q6NSJ2 640 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.43■■□□□ 1.82
TMEM260-207ENST00000555497 LNX1Q8TBB1 728 aaPredicted RBP26.43■■□□□ 1.82
TMEM260-207ENST00000555497 EMSYQ7Z589 1322 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 SORBS3O60504 671 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 PEX10O60683 326 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 USP2O75604 605 aaPredicted RBP26.43■■□□□ 1.82
TMEM260-207ENST00000555497 HDXQ7Z353 690 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 RDM1Q8NG50 284 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 ACAD9Q9H845 621 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 APEX2Q9UBZ4 518 aa26.43■■□□□ 1.82
TMEM260-207ENST00000555497 VAMP7P51809 220 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 ITIH3Q06033 890 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 GPC2Q8N158 579 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 SLC30A5Q8TAD4 765 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 BSNDQ8WZ55 320 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 ZBTB9Q96C00 473 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 WDR90Q96KV7 1748 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 MAFGO15525 162 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 KRT13P13646 458 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 ANXA13P27216 316 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 DNA2P51530 1060 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 XXYLT1Q8NBI6 393 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 TMEM161BQ8NDZ6 487 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 FBXO41Q8TF61 875 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 HDAC7Q8WUI4 952 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 HINFPQ9BQA5 517 aa26.42■■□□□ 1.82
TMEM260-207ENST00000555497 ZCCHC17Q9NP64 241 aaKnown RBP26.42■■□□□ 1.82
TMEM260-207ENST00000555497 ANKRD63C9JTQ0 380 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 NPTX2P47972 431 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 SP4Q02446 784 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 TERF2Q15554 542 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 SWSAP1Q6NVH7 229 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 INTS8Q75QN2 995 aaKnown RBP26.41■■□□□ 1.82
TMEM260-207ENST00000555497 U2AF1L4Q8WU68 220 aaKnown RBP26.41■■□□□ 1.82
TMEM260-207ENST00000555497 SYT11Q9BT88 431 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 LRRC1Q9BTT6 524 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 GOLPH3Q9H4A6 298 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 TSKSQ9UJT2 592 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms