RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 HAPLN2Q9GZV7 340 aa7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 SAE1Q9UBE0 346 aaPredicted RBP7.07□□□□□ -1.28
CKS1BP1-201ENST00000555221 A0A0G2JNJ9 132 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 ZRANB2O95218 330 aaKnown RBP eCLIP7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 CELA3BP08861 270 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 SLC16A1P53985 500 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 CDK17Q00537 523 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 TCIRG1Q13488 830 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 HLTFQ14527 1009 aaKnown RBP eCLIP7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 MAN2A1Q16706 1144 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 MINDY4Q4G0A6 757 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 TMEM200BQ69YZ2 307 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 TRMT10BQ6PF06 316 aaKnown RBP7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 C14orf80Q86SX3 495 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 IFNL2Q8IZJ0 200 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 CLIP3Q96DZ5 547 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 SLC2A13Q96QE2 648 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 POLR3BQ9NW08 1133 aaPredicted RBP7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 Q9UFV3 132 aa7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 EVLQ9UI08 416 aaPredicted RBP7.06□□□□□ -1.28
CKS1BP1-201ENST00000555221 ETV2O00321 342 aaPredicted RBP7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 MED14OSP0DP75 135 aa7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 ADCY8P40145 1251 aa7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 TBX4P57082 545 aa7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 MALLQ13021 153 aa7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 RRP12Q5JTH9 1297 aaKnown RBP7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 LMBR1LQ6UX01 489 aa7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 SYDE1Q6ZW31 735 aaPredicted RBP7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 FAM129CQ86XR2 697 aa7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 TMEFF1Q8IYR6 380 aa7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 THEMISQ8N1K5 641 aaPredicted RBP7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 FNIP1Q8TF40 1166 aa7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 SAP30BPQ9UHR5 308 aaKnown RBP7.05□□□□□ -1.28
CKS1BP1-201ENST00000555221 PRPF3O43395 683 aaKnown RBP7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 SEC24DO94855 1032 aaPredicted RBP7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 PLA2G1BP04054 148 aaKnown RBP7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 COL6A1P12109 1028 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 HSPA6P17066 643 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 RPL13P26373 211 aaKnown RBP7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 IL13P35225 146 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 MLLT6P55198 1093 aaPredicted RBP7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 KIF23Q02241 960 aaPredicted RBP7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 ADRM1Q16186 407 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 MUM1L1Q5H9M0 696 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 PRR31Q5SQ13 230 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 GJC2Q5T442 439 aaPredicted RBP7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 CNKSR3Q6P9H4 555 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 BTNL9Q6UXG8 535 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 GAREM2Q75VX8 874 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 PPM1NQ8N819 430 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 FAM84AQ96KN4 292 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 PPP1R16BQ96T49 567 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 OSBPL6Q9BZF3 934 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 L2HGDHQ9H9P8 463 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 NMRK2Q9NPI5 230 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 TUBD1Q9UJT1 453 aa7.04□□□□□ -1.28
CKS1BP1-201ENST00000555221 TCAF2A6NFQ2 919 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 RFXAPO00287 272 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 ERC2O15083 957 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 FARP2O94887 1054 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 ZNF28P17035 718 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 LPOP22079 712 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 POLD1P28340 1107 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 SESN2P58004 480 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 ANTXR2P58335 489 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 CCT2P78371 535 aaKnown RBP7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 CAP1Q01518 475 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 MESP2Q0VG99 397 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 EIF4HQ15056 248 aaKnown RBP7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 MCTP1Q6DN14 999 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 CCSAPQ6IQ19 270 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 FAM180AQ6UWF9 173 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 EPM2AIP1Q7L775 607 aaPredicted RBP7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 WDR92Q96MX6 357 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 PWWP2AQ96N64 755 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 GREM2Q9H772 168 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 NTMQ9P121 344 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 RCAN3Q9UKA8 241 aa7.03□□□□□ -1.28
CKS1BP1-201ENST00000555221 DTNBO60941 627 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 CAND2O75155 1236 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 OFD1O75665 1012 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 FSBPO95073 299 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 HMGCRP04035 888 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 GNALP38405 381 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 ETV4P43268 484 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 MEF2AQ02078 507 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 TOP3AQ13472 1001 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 UAP1L1Q3KQV9 507 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 IFIT1BQ5T764 474 aaKnown RBP7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 SAPCD2Q86UD0 394 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 PPP1R14CQ8TAE6 165 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 ZCCHC14Q8WYQ9 949 aaKnown RBP7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 GFM2Q969S9 779 aaKnown RBP7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 FDXACB1Q9BRP7 624 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 ADI1Q9BV57 179 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 PRDM11Q9NQV5 511 aa7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 SPATA6Q9NWH7 488 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 CNOT6Q9ULM6 557 aaKnown RBP7.02□□□□□ -1.29
CKS1BP1-201ENST00000555221 VWA7Q9Y334 891 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms