RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 C2orf71A6NGG8 1288 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 CPA1P15085 419 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 IFNAR1P17181 557 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 SP100P23497 879 aaPredicted RBP17.43■□□□□ 0.38
NEDD1-207ENST00000555114 MTHFRP42898 656 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 MTMR3Q13615 1198 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 XKR3Q5GH77 459 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 ZNF598Q86UK7 904 aaKnown RBP17.43■□□□□ 0.38
NEDD1-207ENST00000555114 TRIM22Q8IYM9 498 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 UBALD2Q8IYN6 164 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 SLC5A5Q92911 643 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 UNC45AQ9H3U1 944 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 DZANK1Q9NVP4 752 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 VPS54Q9P1Q0 977 aa17.43■□□□□ 0.38
NEDD1-207ENST00000555114 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 FGFR4P22455 802 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 AVPR2P30518 371 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 BCAR1P56945 870 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 TCF15Q12870 199 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 UGCGQ16739 394 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 MTERF2Q49AM1 385 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 TWF2Q6IBS0 349 aaKnown RBP17.42■□□□□ 0.38
NEDD1-207ENST00000555114 ZNF410Q86VK4 478 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 KCNB2Q92953 911 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 JPH2Q9BR39 696 aaPredicted RBP17.42■□□□□ 0.38
NEDD1-207ENST00000555114 NIFKQ9BYG3 293 aaKnown RBP17.42■□□□□ 0.38
NEDD1-207ENST00000555114 STK39Q9UEW8 545 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 SORCS3Q9UPU3 1222 aa17.42■□□□□ 0.38
NEDD1-207ENST00000555114 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.41■□□□□ 0.38
NEDD1-207ENST00000555114 ST18O60284 1047 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 CLASP2O75122 1294 aaKnown RBP17.41■□□□□ 0.38
NEDD1-207ENST00000555114 ZC3H11AO75152 810 aaKnown RBP eCLIP17.41■□□□□ 0.38
NEDD1-207ENST00000555114 CXCL14O95715 111 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 HSPA4P34932 840 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 RAB27AP51159 221 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 POLGP54098 1239 aaPredicted RBP17.41■□□□□ 0.38
NEDD1-207ENST00000555114 TARBP2Q15633 366 aaKnown RBP17.41■□□□□ 0.38
NEDD1-207ENST00000555114 Q4G0T1 1027 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 GLB1LQ6UWU2 654 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 VPS52Q8N1B4 723 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 KREMEN2Q8NCW0 462 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 TBCKQ8TEA7 893 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 TRAIPQ9BWF2 469 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 SNX14Q9Y5W7 946 aa17.41■□□□□ 0.38
NEDD1-207ENST00000555114 PHKA2P46019 1235 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 VCPP55072 806 aaKnown RBP17.4■□□□□ 0.38
NEDD1-207ENST00000555114 RNASELQ05823 741 aaKnown RBP17.4■□□□□ 0.38
NEDD1-207ENST00000555114 NTRK3Q16288 839 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 ATAT1Q5SQI0 421 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 PPFIBP1Q86W92 1011 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 TDRD5Q8NAT2 981 aaKnown RBP17.4■□□□□ 0.38
NEDD1-207ENST00000555114 ATOH1Q92858 354 aaPredicted RBP17.4■□□□□ 0.38
NEDD1-207ENST00000555114 PGBD4Q96DM1 585 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 PHOX2BQ99453 314 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 AGXT2Q9BYV1 514 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 POMKQ9H5K3 350 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 PCDHA4Q9UN74 947 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 PIN4Q9Y237 131 aaKnown RBP17.4■□□□□ 0.38
NEDD1-207ENST00000555114 ZDBF2Q9HCK1 2354 aa17.4■□□□□ 0.38
NEDD1-207ENST00000555114 A0A087WZ62 844 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 NT5C1B-RDH14C9J2C7 533 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 DKC1O60832 514 aaKnown RBP eCLIP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 PSMD10O75832 226 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 CCT2P78371 535 aaKnown RBP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 NOMO2Q5JPE7 1267 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 RARS2Q5T160 578 aaKnown RBP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 CATSPER4Q7RTX7 472 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 DDX53Q86TM3 631 aaKnown RBP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 RHPN2Q8IUC4 686 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 EXOC8Q8IYI6 725 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 FAM177A1Q8N128 213 aaPredicted RBP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 PLCD3Q8N3E9 789 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 FDXACB1Q9BRP7 624 aaPredicted RBP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 ZBP1Q9H171 429 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 FAM105AQ9NUU6 356 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 SUCLA2Q9P2R7 463 aaPredicted RBP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 DBR1Q9UK59 544 aaKnown RBP17.39■□□□□ 0.37
NEDD1-207ENST00000555114 IRAK3Q9Y616 596 aa17.39■□□□□ 0.37
NEDD1-207ENST00000555114 CYP3A7-CYP3A51PA0A087WV96 503 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 IGKV6-21A0A0C4DH24 114 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 C2CD4DB7Z1M9 353 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 CPLX1O14810 134 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 CSDE1O75534 798 aaKnown RBP17.38■□□□□ 0.37
NEDD1-207ENST00000555114 REC8O95072 547 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 CTSAP10619 480 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 CYP3A7P24462 503 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 PDIA3P30101 505 aaKnown RBP17.38■□□□□ 0.37
NEDD1-207ENST00000555114 PSMC5P62195 406 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 DRP2Q13474 957 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 GALNT17Q6IS24 598 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 KIAA1841Q6NSI8 718 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 CPLX2Q6PUV4 134 aaKnown RBP17.38■□□□□ 0.37
NEDD1-207ENST00000555114 MOXD1Q6UVY6 613 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 CABP7Q86V35 215 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 SKAP1Q86WV1 359 aa17.38■□□□□ 0.37
NEDD1-207ENST00000555114 URGCPQ8TCY9 931 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms