RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ANKRD35Q8N283 1001 aa7.42□□□□□ -1.22
VRK1-203ENST00000555067 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
VRK1-203ENST00000555067 DNAJC8O75937 253 aaPredicted RBP7.41□□□□□ -1.22
VRK1-203ENST00000555067 ATP2C1P98194 919 aaPredicted RBP7.41□□□□□ -1.22
VRK1-203ENST00000555067 SAFB2Q14151 953 aaKnown RBP eCLIP7.41□□□□□ -1.22
VRK1-203ENST00000555067 BMS1Q14692 1282 aaKnown RBP7.41□□□□□ -1.22
VRK1-203ENST00000555067 EPHA7Q15375 998 aa7.41□□□□□ -1.22
VRK1-203ENST00000555067 KIAA1958Q8N8K9 716 aa7.41□□□□□ -1.22
VRK1-203ENST00000555067 RPGRQ92834 1020 aaKnown RBP7.41□□□□□ -1.22
VRK1-203ENST00000555067 MRFAP1L1Q96HT8 127 aa7.41□□□□□ -1.22
VRK1-203ENST00000555067 C16orf92Q96LL3 132 aa7.41□□□□□ -1.22
VRK1-203ENST00000555067 POLR3BQ9NW08 1133 aaPredicted RBP7.41□□□□□ -1.22
VRK1-203ENST00000555067 TNPO3Q9Y5L0 923 aaKnown RBP7.41□□□□□ -1.22
VRK1-203ENST00000555067 TRAF5O00463 557 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 BCAR1P56945 870 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 CRHR2Q13324 411 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 SQSTM1Q13501 440 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 ZNF460Q14592 562 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 GAGE13Q4V321 117 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 PRAMEF9Q5VWM5 478 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 UBE2R2Q712K3 238 aaPredicted RBP7.4□□□□□ -1.22
VRK1-203ENST00000555067 BMP8AQ7Z5Y6 402 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 TMPRSS6Q8IU80 811 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 NKD2Q969F2 451 aaPredicted RBP7.4□□□□□ -1.22
VRK1-203ENST00000555067 B4GALT6Q9UBX8 382 aa7.4□□□□□ -1.22
VRK1-203ENST00000555067 RBM8AQ9Y5S9 174 aaKnown RBP7.4□□□□□ -1.22
VRK1-203ENST00000555067 BPIFB4P59827 614 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 ADCY1Q08828 1119 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 TCIRG1Q13488 830 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 PIK3R6Q5UE93 754 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 LRCH2Q5VUJ6 765 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 CLIP3Q96DZ5 547 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 TUBGCP5Q96RT8 1024 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 PARPBPQ9NWS1 579 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 SH3BP1Q9Y3L3 701 aa7.39□□□□□ -1.23
VRK1-203ENST00000555067 C2orf78A6NCI8 922 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 CBX4O00257 560 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 MAFGO15525 162 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 RFPL3O75679 317 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 FBLP22087 321 aaKnown RBP7.38□□□□□ -1.23
VRK1-203ENST00000555067 STAT3P40763 770 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 ANTXR2P58335 489 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 ADAM8P78325 824 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
VRK1-203ENST00000555067 ANKRD53Q8N9V6 530 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 SH3TC2Q8TF17 1288 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 MIEF2Q96C03 454 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 DYDC2Q96IM9 177 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 WDR92Q96MX6 357 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 HAPLN2Q9GZV7 340 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 MAGEL2Q9UJ55 1249 aa7.38□□□□□ -1.23
VRK1-203ENST00000555067 TLDC2A0PJX2 215 aa7.37□□□□□ -1.23
VRK1-203ENST00000555067 RAMP2O60895 175 aa7.37□□□□□ -1.23
VRK1-203ENST00000555067 PEX11BO96011 259 aa7.37□□□□□ -1.23
VRK1-203ENST00000555067 JMJD7P0C870 316 aa7.37□□□□□ -1.23
VRK1-203ENST00000555067 CCDC144BQ3MJ40 725 aa7.37□□□□□ -1.23
VRK1-203ENST00000555067 SYNPOQ8N3V7 929 aa7.37□□□□□ -1.23
VRK1-203ENST00000555067 RPL10LQ96L21 214 aaKnown RBP7.37□□□□□ -1.23
VRK1-203ENST00000555067 GPHA2Q96T91 129 aa7.37□□□□□ -1.23
VRK1-203ENST00000555067 TMEM260Q9NX78 707 aa7.37□□□□□ -1.23
VRK1-203ENST00000555067 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
VRK1-203ENST00000555067 GOLGA8BA8MQT2 603 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 FOXN1O15353 648 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 RRP1BQ14684 758 aaKnown RBP7.36□□□□□ -1.23
VRK1-203ENST00000555067 CDCA2Q69YH5 1023 aaPredicted RBP7.36□□□□□ -1.23
VRK1-203ENST00000555067 GAREM2Q75VX8 874 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 CLEC14AQ86T13 490 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 PHYKPLQ8IUZ5 450 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 ZZZ3Q8IYH5 903 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 C7orf31Q8N865 590 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 PLA2G15Q8NCC3 412 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 ORAI3Q9BRQ5 295 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 IL23AQ9NPF7 189 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 INTS7Q9NVH2 962 aaKnown RBP7.36□□□□□ -1.23
VRK1-203ENST00000555067 MAGEC2Q9UBF1 373 aaPredicted RBP7.36□□□□□ -1.23
VRK1-203ENST00000555067 HECAQ9UBI9 543 aaPredicted RBP7.36□□□□□ -1.23
VRK1-203ENST00000555067 SYNPO2Q9UMS6 1093 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 SPO11Q9Y5K1 396 aa7.36□□□□□ -1.23
VRK1-203ENST00000555067 SBNO2Q9Y2G9 1366 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 JUNP05412 331 aaKnown RBP7.35□□□□□ -1.23
VRK1-203ENST00000555067 VSIG10L2P0DP72 767 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 PTX3P26022 381 aaPredicted RBP7.35□□□□□ -1.23
VRK1-203ENST00000555067 MYBPC3Q14896 1274 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 CFAP100Q494V2 611 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 KRT40Q6A162 431 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 TIGD7Q6NT04 549 aaPredicted RBP7.35□□□□□ -1.23
VRK1-203ENST00000555067 FAM111BQ6SJ93 734 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 ELF4Q99607 663 aaPredicted RBP7.35□□□□□ -1.23
VRK1-203ENST00000555067 TCF25Q9BQ70 676 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 PITHD1Q9GZP4 211 aaPredicted RBP7.35□□□□□ -1.23
VRK1-203ENST00000555067 C14orf93Q9H972 538 aaKnown RBP7.35□□□□□ -1.23
VRK1-203ENST00000555067 SLC2A4RGQ9NR83 387 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 RCAN3Q9UKA8 241 aa7.35□□□□□ -1.23
VRK1-203ENST00000555067 PPP1R12AO14974 1030 aaPredicted RBP7.34□□□□□ -1.23
VRK1-203ENST00000555067 DAPK3O43293 454 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 TOX4O94842 621 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 SLC9A1P19634 815 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 SDSP20132 328 aa7.34□□□□□ -1.23
VRK1-203ENST00000555067 PABPC4Q13310 644 aaKnown RBP eCLIP7.34□□□□□ -1.235e-11■□□□□ 10.7
VRK1-203ENST00000555067 ACAP1Q15027 740 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms