RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 FSTL1Q12841 308 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 PCNX4Q63HM2 1172 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 CCNI2Q6ZMN8 369 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-211ENST00000555055 IRF2BP2Q7Z5L9 587 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 RIT2Q99578 217 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 NCAPGQ9BPX3 1015 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 FZD9O00144 591 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 ZBED4O75132 1171 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 PALMO75781 387 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 LCA5LO95447 670 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 P4HBP07237 508 aaKnown RBP16.16■□□□□ 0.18
XRCC3-211ENST00000555055 GAP43P17677 238 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 PEX3P56589 373 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 MCF2L2Q86YR7 1114 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 SCYL3Q8IZE3 742 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 ZNF280CQ8ND82 737 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 BORCS6Q96GS4 357 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 CCDC43Q96MW1 224 aaKnown RBP16.16■□□□□ 0.18
XRCC3-211ENST00000555055 PICK1Q9NRD5 415 aa16.16■□□□□ 0.18
XRCC3-211ENST00000555055 SLC26A4O43511 780 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 ZNF131P52739 623 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 SLC7A5Q01650 507 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 TMEM132BQ14DG7 1078 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 ARHGAP44Q17R89 818 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 FAM102BQ5T8I3 360 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 CCDC70Q6NSX1 233 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 FOXR2Q6PJQ5 311 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 CREG2Q8IUH2 290 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 TRIM58Q8NG06 486 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 AENQ8WTP8 325 aaKnown RBP16.15■□□□□ 0.18
XRCC3-211ENST00000555055 TCEAL9Q9UHQ7 104 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 SNX12Q9UMY4 172 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 DOCK5Q9H7D0 1870 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 GOLGA8KD6RF30 607 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 AGPSO00116 658 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 MYBL2P10244 700 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 PSMC2P35998 433 aaKnown RBP16.15■□□□□ 0.18
XRCC3-211ENST00000555055 QARSP47897 775 aaKnown RBP16.15■□□□□ 0.18
XRCC3-211ENST00000555055 SLC18A3Q16572 532 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 HS2ST1Q7LGA3 356 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 SH3GL2Q99962 352 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 SELENOOQ9BVL4 669 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 TSGA10Q9BZW7 698 aa16.15■□□□□ 0.18
XRCC3-211ENST00000555055 POLR2AP24928 1970 aaKnown RBP16.15■□□□□ 0.18
XRCC3-211ENST00000555055 SSU72P8A0A1W2PR75 194 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 RBAK-RBAKDNI3L0D1 243 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 GGCXP38435 758 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 XKR9Q5GH70 373 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 MMGT1Q8N4V1 131 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 OSBPL9Q96SU4 736 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 TLR10Q9BXR5 811 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 GOLGA6CA6NDK9 693 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 EBAG9O00559 213 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 RGS20O76081 388 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 GOLGA6DP0CG33 693 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 RPS12P25398 132 aaKnown RBP16.14■□□□□ 0.17
XRCC3-211ENST00000555055 IQCDQ96DY2 449 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 R3HDMLQ9H3Y0 253 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 GOLGA6AQ9NYA3 693 aa16.14■□□□□ 0.17
XRCC3-211ENST00000555055 GOLGA6BA6NDN3 693 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 USP8P40818 1118 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 FMO5P49326 533 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 IRAK1P51617 712 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 ARHGAP27Q6ZUM4 889 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 SPATS2Q86XZ4 545 aaKnown RBP16.13■□□□□ 0.17
XRCC3-211ENST00000555055 TEX2Q8IWB9 1127 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 PROCA1Q8NCQ7 364 aaPredicted RBP16.13■□□□□ 0.17
XRCC3-211ENST00000555055 MYCBPQ99417 103 aaPredicted RBP16.13■□□□□ 0.17
XRCC3-211ENST00000555055 AIPL1Q9NZN9 384 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 ZNF214Q9UL59 606 aaPredicted RBP16.13■□□□□ 0.17
XRCC3-211ENST00000555055 COL11A1P12107 1806 aaPredicted RBP16.13■□□□□ 0.17
XRCC3-211ENST00000555055 BRCA1P38398 1863 aaKnown RBP16.13■□□□□ 0.17
XRCC3-211ENST00000555055 CCDC169A6NNP5 214 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 EIF3DO15371 548 aaKnown RBP eCLIP16.13■□□□□ 0.17
XRCC3-211ENST00000555055 NR3C2P08235 984 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 PRLRP16471 622 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 SAAL1Q96ER3 474 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 NOX5Q96PH1 765 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 ALS2CR12Q96Q35 445 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 ACP6Q9NPH0 428 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 FRMD4BQ9Y2L6 1034 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 HYOU1Q9Y4L1 999 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 DNAH12Q6ZR08 3092 aa16.13■□□□□ 0.17
XRCC3-211ENST00000555055 EIF3HO15372 352 aaKnown RBP eCLIP16.12■□□□□ 0.176e-6■■■■□ 25.8
XRCC3-211ENST00000555055 OPA1O60313 960 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 ERLIN2O94905 339 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 BCRP11274 1271 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 TNFRSF8P28908 595 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 GCLMP48507 274 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 SKOR1P84550 965 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 ANO5Q75V66 913 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 POP1Q99575 1024 aaKnown RBP16.12■□□□□ 0.17
XRCC3-211ENST00000555055 SEPT11Q9NVA2 429 aaKnown RBP16.12■□□□□ 0.17
XRCC3-211ENST00000555055 CHORDC1Q9UHD1 332 aaPredicted RBP16.12■□□□□ 0.17
XRCC3-211ENST00000555055 ODF2LQ9ULJ1 636 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 DDNO94850 711 aaPredicted RBP16.12■□□□□ 0.17
XRCC3-211ENST00000555055 PALB2Q86YC2 1186 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 GLYCTKQ8IVS8 523 aa16.12■□□□□ 0.17
XRCC3-211ENST00000555055 PLEKHO2Q8TD55 490 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms