RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TRAF5	O00463	557 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	FBXO21	O94952	628 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	NPTXR	O95502	500 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	ZBTB48	P10074	688 aa	Predicted RBP	7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	AOAH	P28039	575 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	KIF1A	Q12756	1690 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	SPATA31A5	Q5VU36	1347 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	CDCA2	Q69YH5	1023 aa	Predicted RBP	7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	SPATA31A7	Q8IWB4	1347 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	CHST14	Q8NCH0	376 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	NGDN	Q8NEJ9	315 aa	Known RBP	7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	NUDT10	Q8NFP7	164 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	DLG3	Q92796	817 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	NUDT11	Q96G61	164 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	YTHDC1	Q96MU7	727 aa	Known RBP	7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	CDK19	Q9BWU1	502 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	KCNH7	Q9NS40	1196 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	KCND1	Q9NSA2	647 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	MAGEC2	Q9UBF1	373 aa	Predicted RBP	7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	B3GALT1	Q9Y5Z6	326 aa		7.14	□□□□□ -1.27
PSMC6-208	ENST00000554956	GPRASP1	Q5JY77	1395 aa		7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	CYP1A1	P04798	512 aa	Predicted RBP	7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	TMEM132B	Q14DG7	1078 aa		7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	SMAD2	Q15796	467 aa	Known RBP	7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	FAM26F	Q5R3K3	315 aa		7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	OTOP1	Q7RTM1	612 aa		7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	NINJ1	Q92982	152 aa		7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	FEZ1	Q99689	392 aa		7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	BOC	Q9BWV1	1114 aa		7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	RGPD8	O14715	1765 aa	Predicted RBP	7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.13	□□□□□ -1.27
PSMC6-208	ENST00000554956	ADGRB2	O60241	1585 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	TULP4	Q9NRJ4	1543 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	ATP7B	P35670	1465 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	KIAA0232	Q92628	1395 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	PTPDC1	A2A3K4	754 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	CBX4	O00257	560 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	ENPP3	O14638	875 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	FOXP2	O15409	715 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	PRICKLE3	O43900	615 aa	Predicted RBP	7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	KPNA6	O60684	536 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	CYP7B1	O75881	506 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	MPIG6B	O95866	241 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	KNG1	P01042	644 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	PTGS1	P23219	599 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	CTSW	P56202	376 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	HERVK_113	P62684	666 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	NBPF8	Q3BBV2	869 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	CFAP100	Q494V2	611 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	DALRD3	Q5D0E6	543 aa	Known RBP	7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	CATSPERE	Q5SY80	951 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	CNNM4	Q6P4Q7	775 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	LRSAM1	Q6UWE0	723 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	FERMT3	Q86UX7	667 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	NIM1K	Q8IY84	436 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	ASB15	Q8WXK1	588 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	PRDM11	Q9NQV5	511 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	UCKL1	Q9NWZ5	548 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	RTEL1	Q9NZ71	1219 aa		7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	MARF1	Q9Y4F3	1742 aa	Known RBP	7.12	□□□□□ -1.27
PSMC6-208	ENST00000554956	ACE	P12821	1306 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	SPATA31A1	Q5TZJ5	1347 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	TRPM3	Q9HCF6	1732 aa	Predicted RBP	7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	MROH6	A6NGR9	719 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	DVL2	O14641	736 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	HIP1R	O75146	1068 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	KLHL18	O94889	574 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	CNR2	P34972	360 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	UBE2R2	Q712K3	238 aa	Predicted RBP	7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	FRMD5	Q7Z6J6	570 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	LRRTM3	Q86VH5	581 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	MBD6	Q96DN6	1003 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	WNK4	Q96J92	1243 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	TMEM168	Q9H0V1	697 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	INCENP	Q9NQS7	918 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	INTS7	Q9NVH2	962 aa	Known RBP	7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	FTSJ1	Q9UET6	329 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	RAPGEFL1	Q9UHV5	662 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	BRWD3	Q6RI45	1802 aa		7.11	□□□□□ -1.27
PSMC6-208	ENST00000554956	KRTAP4-8	A0A0G2JLE6	195 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	FLT3	P36888	993 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	IL13RA1	P78552	427 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	NFIX	Q14938	502 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	EZH2	Q15910	746 aa	Known RBP	7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	LILRA6	Q6PI73	481 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	ERCC4	Q92889	916 aa	Predicted RBP	7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	LCOR	Q96JN0	433 aa	Predicted RBP	7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	GBP4	Q96PP9	640 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	CAMKK2	Q96RR4	588 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	AMN	Q9BXJ7	453 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	CABP5	Q9NP86	173 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	ABCA3	Q99758	1704 aa		7.1	□□□□□ -1.27
PSMC6-208	ENST00000554956	PLCH1	Q4KWH8	1693 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	ALS2	Q96Q42	1657 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	POLR3A	O14802	1390 aa	Predicted RBP	7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	TLDC2	A0PJX2	215 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	PRAMEF22	A3QJZ6	481 aa		7.09	□□□□□ -1.27
PSMC6-208	ENST00000554956	KRTAP9-7	A8MTY7	169 aa		7.09	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms