RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 HMGB1P09429 215 aaKnown RBP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 ZBTB48P10074 688 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 HSP90B1P14625 803 aaKnown RBP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 EIF4HQ15056 248 aaKnown RBP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 STILQ15468 1287 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 WDR72Q3MJ13 1102 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 CATSPEREQ5SY80 951 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 EP400NLQ6ZTU2 488 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 DDX42Q86XP3 938 aaKnown RBP eCLIP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 ZFPM1Q8IX07 1006 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 NXPE1Q8N323 547 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 ATL2Q8NHH9 583 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 USP7Q93009 1102 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 FAM126AQ9BYI3 521 aaPredicted RBP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 PCED1AQ9H1Q7 454 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 SEC61A2Q9H9S3 476 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 TESMINQ9Y4I5 508 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 B3GALT1Q9Y5Z6 326 aa2.1□□□□□ -2.07
PRPF39-208ENST00000554785 PCF11O94913 1555 aaKnown RBP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 WDR33Q9C0J8 1336 aaKnown RBP2.1□□□□□ -2.07
PRPF39-208ENST00000554785 SLC12A8A0AV02 714 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 PRAMEF22A3QJZ6 481 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 ZNF891A8MT65 544 aaPredicted RBP2.09□□□□□ -2.07
PRPF39-208ENST00000554785 DVL2O14641 736 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 BRINP1O60477 761 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 EYA4O95677 639 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 CR2P20023 1033 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 CDK11BP21127 795 aaKnown RBP2.09□□□□□ -2.07
PRPF39-208ENST00000554785 GJA4P35212 333 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 ETV4P43268 484 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 STAT5BP51692 787 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 RAC3P60763 192 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 HERVK_113P62684 666 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 DSG1Q02413 1049 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 TMEM132BQ14DG7 1078 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 SMN1Q16637 294 aaKnown RBP2.09□□□□□ -2.07
PRPF39-208ENST00000554785 CRB2Q5IJ48 1285 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 AGBL4Q5VU57 503 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 TRIM68Q6AZZ1 485 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 OTOP1Q7RTM1 612 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 REXO1L1PQ8IX06 675 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 GPR135Q8IZ08 494 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 RPUSD2Q8IZ73 545 aaKnown RBP2.09□□□□□ -2.07
PRPF39-208ENST00000554785 GIMAP8Q8ND71 665 aaPredicted RBP2.09□□□□□ -2.07
PRPF39-208ENST00000554785 DLG3Q92796 817 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 FOXRED1Q96CU9 486 aaPredicted RBP2.09□□□□□ -2.07
PRPF39-208ENST00000554785 GBP4Q96PP9 640 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 TTC1Q99614 292 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 BOCQ9BWV1 1114 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 BTBD2Q9BX70 525 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 VPS11Q9H270 941 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 IFT22Q9H7X7 185 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 AGO3Q9H9G7 860 aaKnown RBP2.09□□□□□ -2.07
PRPF39-208ENST00000554785 HECAQ9UBI9 543 aaPredicted RBP2.09□□□□□ -2.07
PRPF39-208ENST00000554785 MAGEL2Q9UJ55 1249 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 OAZ3Q9UMX2 235 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 ABCC2Q92887 1545 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 TOP2BQ02880 1626 aa2.09□□□□□ -2.07
PRPF39-208ENST00000554785 GOLGA6L22H0YM25 854 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 NEMP1O14524 444 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 MUSKO15146 869 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 ZEB2O60315 1214 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 CDC14BO60729 498 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 KRT37O76014 449 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 HMGCRP04035 888 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 ATP2A2P16615 1042 aaKnown RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 BPIP17213 487 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 ECE1P42892 770 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 LSSP48449 732 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 SELENOPP49908 381 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 CDKN1CP49918 316 aaPredicted RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 MRE11P49959 708 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 INHBEP58166 350 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 ANTXR2P58335 489 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 EVA1CP58658 441 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 IL2P60568 153 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 DGCR2P98153 550 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 FOXL1Q12952 345 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 MOGSQ13724 837 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 SAFB2Q14151 953 aaKnown RBP eCLIP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 PCOLCEQ15113 449 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 RNF219Q5W0B1 726 aaPredicted RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 RTN4RL1Q86UN2 441 aaPredicted RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 AMER2Q8N7J2 671 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 PRPF38AQ8NAV1 312 aaKnown RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 SMC1BQ8NDV3 1235 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 OR14K1Q8NGZ2 314 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 WDR66Q8TBY9 1149 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 CHTF18Q8WVB6 975 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 ERCC4Q92889 916 aaPredicted RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 EXTL1Q92935 676 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 GPR101Q96P66 508 aaPredicted RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 ADOQ96SZ5 270 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 PLA2G12BQ9BX93 195 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 OR10A5Q9H207 317 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 KCNH7Q9NS40 1196 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 THG1LQ9NWX6 298 aaKnown RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 ING1Q9UK53 422 aaPredicted RBP2.09□□□□□ -2.08
PRPF39-208ENST00000554785 NR2E1Q9Y466 385 aa2.09□□□□□ -2.08
PRPF39-208ENST00000554785 PTPRMP28827 1452 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms