RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 XKR3Q5GH77 459 aa13.76□□□□□ -0.21
MTHFD1-207ENST00000554677 PLPP4Q5VZY2 271 aa13.76□□□□□ -0.21
MTHFD1-207ENST00000554677 MOXD1Q6UVY6 613 aa13.76□□□□□ -0.21
MTHFD1-207ENST00000554677 TRIM22Q8IYM9 498 aa13.76□□□□□ -0.21
MTHFD1-207ENST00000554677 PHF7Q9BWX1 381 aaPredicted RBP13.76□□□□□ -0.21
MTHFD1-207ENST00000554677 C22orf23Q9BZE7 217 aa13.76□□□□□ -0.21
MTHFD1-207ENST00000554677 CYP46A1Q9Y6A2 500 aa13.76□□□□□ -0.21
MTHFD1-207ENST00000554677 CACNA1HO95180 2353 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 A0A087WZ62 844 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 HOXA2O43364 376 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 SLC37A4O43826 429 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 ANKRD54Q6NXT1 300 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 ANO5Q75V66 913 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 SLC39A11Q8N1S5 342 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 NLRP7Q8WX94 980 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 FBXL18Q96ME1 805 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 ZNF558Q96NG5 402 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 FDXACB1Q9BRP7 624 aaPredicted RBP13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 TRAIPQ9BWF2 469 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 SPG21Q9NZD8 308 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 KCNJ14Q9UNX9 436 aa13.75□□□□□ -0.21
MTHFD1-207ENST00000554677 DDX11L8A8MPP1 907 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 DTNBO60941 627 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 MAFO75444 373 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 ZXDAP98168 799 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 STK3Q13188 491 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 INF2Q27J81 1249 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 GALNT17Q6IS24 598 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 BMP8AQ7Z5Y6 402 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 KSR1Q8IVT5 923 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 FAM177A1Q8N128 213 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 LRRC43Q8N309 656 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 RNF169Q8NCN4 708 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 PHF20Q9BVI0 1012 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 GCOM2Q9BZD3 368 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 NGRNQ9NPE2 291 aaKnown RBP13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 CHST12Q9NRB3 414 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 GJB4Q9NTQ9 266 aa13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 WRAP73Q9P2S5 460 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 PUF60Q9UHX1 559 aaKnown RBP13.74□□□□□ -0.21
MTHFD1-207ENST00000554677 C2orf71A6NGG8 1288 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 MEIS3P2A8K0S8 358 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 NT5C1B-RDH14C9J2C7 533 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 CPLX1O14810 134 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 PPM1AP35813 382 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 TECP42680 631 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 PHKA2P46019 1235 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 BCAR1P56945 870 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 CDC42EP1Q00587 391 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 KRT17Q04695 432 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 SCRN1Q12765 414 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 NONOQ15233 471 aaKnown RBP eCLIP13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 PLA2G4FQ68DD2 849 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 TRIM67Q6ZTA4 783 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 TMC7Q7Z402 723 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 ABI1Q8IZP0 508 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 MRPL43Q8N983 215 aaKnown RBP13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 HAS1Q92839 578 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 RPGRIP1Q96KN7 1286 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 KCNH6Q9H252 994 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 IFT122Q9HBG6 1241 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 KCNMB3Q9NPA1 279 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 ENTPD7Q9NQZ7 604 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 PDRG1Q9NUG6 133 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 DACT1Q9NYF0 836 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 SUCLA2Q9P2R7 463 aaPredicted RBP13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 DDX25Q9UHL0 483 aaKnown RBP13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 CDH22Q9UJ99 828 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
MTHFD1-207ENST00000554677 KMT2EQ8IZD2 1858 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 TMEM221A6NGB7 291 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 M0R296 226 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 NPEPPSP55786 919 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 PSMC5P62195 406 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 NHLH1Q02575 133 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 PPP2R5CQ13362 524 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 EARS2Q5JPH6 523 aaKnown RBP13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 LLGL2Q6P1M3 1020 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 KRT25Q7Z3Z0 450 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 TMEM173Q86WV6 379 aaPredicted RBP13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 RHPN2Q8IUC4 686 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 OXER1Q8TDS5 423 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 LPPQ93052 612 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 MFSD14AQ96MC6 490 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 SCLT1Q96NL6 688 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 APOL5Q9BWW9 433 aa13.72□□□□□ -0.21
MTHFD1-207ENST00000554677 ARID2Q68CP9 1835 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 CLASP2O75122 1294 aaKnown RBP13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 ZNF623O75123 536 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 OFD1O75665 1012 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 CTDNEP1O95476 244 aa13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 QARSP47897 775 aaKnown RBP13.71□□□□□ -0.21
MTHFD1-207ENST00000554677 DNM2P50570 870 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms