RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 LONP1P36776 959 aaKnown RBP6.56□□□□□ -1.36
ATXN3-230ENST00000554673 OAZ1P54368 228 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 SLC12A3P55017 1021 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 RACK1P63244 317 aaKnown RBP6.56□□□□□ -1.36
ATXN3-230ENST00000554673 ARID5AQ03989 594 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 POSTNQ15063 836 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 CCL15Q16663 113 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 CEP55Q53EZ4 464 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 ZNF746Q6NUN9 644 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-230ENST00000554673 CABP7Q86V35 215 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 PLA2G4DQ86XP0 818 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 ELOA2Q8IYF1 753 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-230ENST00000554673 NPLOC4Q8TAT6 608 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 MORC4Q8TE76 937 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 USP6NLQ92738 828 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 COPS5Q92905 334 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 SH2D3AQ9BRG2 576 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 PAGR1Q9BTK6 254 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 TEX13BQ9BXU2 312 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 TRIM9Q9C026 710 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 ARHGAP39Q9C0H5 1083 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 JADE2Q9NQC1 790 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 KCNH7Q9NS40 1196 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 STIM2Q9P246 746 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 MORF4L1Q9UBU8 362 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 NOL7Q9UMY1 257 aaKnown RBP6.56□□□□□ -1.36
ATXN3-230ENST00000554673 MRPL11Q9Y3B7 192 aaKnown RBP6.56□□□□□ -1.36
ATXN3-230ENST00000554673 CSADQ9Y600 493 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 CASP8AP2Q9UKL3 1982 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 ZMYM2Q9UBW7 1377 aa6.56□□□□□ -1.36
ATXN3-230ENST00000554673 SYNGAP1Q96PV0 1343 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 FRMD3A2A2Y4 597 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 TRIM49BA6NDI0 452 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 ZBTB42B2RXF5 422 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 PDHXO00330 501 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 AOC2O75106 756 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 SNAI1O95863 264 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 XBP1P17861 261 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 CYP11B2P19099 503 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 MAP2K3P46734 347 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 SCTRP47872 440 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 ALDH5A1P51649 535 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 SOX10P56693 466 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 NLRP12P59046 1061 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 ERVK-9P63128 1117 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 ERVK-24P63145 666 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 CYP4A11Q02928 519 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 STK4Q13043 487 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 PPP2R5CQ13362 524 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 CTTNQ14247 550 aaKnown RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 ZNF792Q3KQV3 632 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 COX20Q5RI15 118 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 DPY19L2P1Q6NXN4 242 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 CCDC62Q6P9F0 684 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 DTHD1Q6ZMT9 781 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 RNF207Q6ZRF8 634 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 CCDC73Q6ZRK6 1079 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 C1orf229Q6ZS94 237 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 ANKRD23Q86SG2 305 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 JAZF1Q86VZ6 243 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 MCF2L2Q86YR7 1114 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 TNS4Q8IZW8 715 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 GJD3Q8N144 294 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 FBF1Q8TES7 1133 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 CCDC12Q8WUD4 166 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 RAD54LQ92698 747 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 LENG1Q96BZ8 264 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 ZBTB10Q96DT7 871 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 DYDC2Q96IM9 177 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 SPACA7Q96KW9 195 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 PPP1R9BQ96SB3 815 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 EIF2AK1Q9BQI3 630 aaKnown RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 OSBPL2Q9H1P3 480 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 TSPAN10Q9H1Z9 355 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 KCNF1Q9H3M0 494 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 SUV39H2Q9H5I1 410 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 ZSWIM4Q9H7M6 989 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 GPAMQ9HCL2 828 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 BRMS1Q9HCU9 246 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 TIMMDC1Q9NPL8 285 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 PDCD11Q14690 1871 aaKnown RBP6.55□□□□□ -1.36
ATXN3-230ENST00000554673 SCN10AQ9Y5Y9 1956 aa6.55□□□□□ -1.36
ATXN3-230ENST00000554673 PFASO15067 1338 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 GSTTP1A0A1W2PQM5 241 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 RASSF10A6NK89 507 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 SPATA31C2B4DYI2 1134 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 DDX39AO00148 427 aaKnown RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 CTAGE5O15320 804 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 KINO60870 393 aaKnown RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 ZBED4O75132 1171 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 FOSP01100 380 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 MYCP01106 439 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 GCFC2P16383 781 aaKnown RBP6.54□□□□□ -1.36
ATXN3-230ENST00000554673 PTMSP20962 102 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 GPC1P35052 558 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 PRCPP42785 496 aa6.54□□□□□ -1.36
ATXN3-230ENST00000554673 HUNKP57058 714 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms